Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 AP3S2-216ENST00000617003 1561 ntBASIC14.12□□□□□ -0.15
NKX6-1P78426 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
NKX6-1P78426 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.12□□□□□ -0.15
NKX6-1P78426 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.12□□□□□ -0.15
NKX6-1P78426 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.12□□□□□ -0.15
NKX6-1P78426 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.12□□□□□ -0.15
NKX6-1P78426 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.12□□□□□ -0.15
NKX6-1P78426 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.11□□□□□ -0.15
NKX6-1P78426 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
NKX6-1P78426 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-1P78426 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX6-1P78426 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.11□□□□□ -0.15
NKX6-1P78426 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.11□□□□□ -0.15
NKX6-1P78426 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NKX6-1P78426 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.11□□□□□ -0.15
NKX6-1P78426 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.11□□□□□ -0.15
NKX6-1P78426 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.11□□□□□ -0.15
NKX6-1P78426 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.11□□□□□ -0.15
NKX6-1P78426 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-1P78426 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX6-1P78426 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NKX6-1P78426 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-1P78426 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-1P78426 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX6-1P78426 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NKX6-1P78426 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
NKX6-1P78426 HLA-H-201ENST00000383620 1096 ntBASIC14.11□□□□□ -0.15
NKX6-1P78426 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-1P78426 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-1P78426 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-1P78426 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX6-1P78426 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-1P78426 AC022494.1-201ENST00000466044 728 ntBASIC14.11□□□□□ -0.15
NKX6-1P78426 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.11□□□□□ -0.15
NKX6-1P78426 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.11□□□□□ -0.15
NKX6-1P78426 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.11□□□□□ -0.15
NKX6-1P78426 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-1P78426 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.11□□□□□ -0.15
NKX6-1P78426 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-1P78426 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-1P78426 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX6-1P78426 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX6-1P78426 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX6-1P78426 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.11□□□□□ -0.15
NKX6-1P78426 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-1P78426 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
NKX6-1P78426 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
NKX6-1P78426 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-1P78426 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-1P78426 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-1P78426 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NKX6-1P78426 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX6-1P78426 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
NKX6-1P78426 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.1□□□□□ -0.15
NKX6-1P78426 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NKX6-1P78426 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.1□□□□□ -0.15
NKX6-1P78426 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.1□□□□□ -0.15
NKX6-1P78426 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
NKX6-1P78426 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.1□□□□□ -0.15
NKX6-1P78426 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.1□□□□□ -0.15
NKX6-1P78426 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.1□□□□□ -0.15
NKX6-1P78426 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.1□□□□□ -0.15
NKX6-1P78426 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 AL138828.2-201ENST00000615812 383 ntBASIC14.1□□□□□ -0.15
NKX6-1P78426 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 SPDYE12P-201ENST00000618416 771 ntBASIC14.1□□□□□ -0.15
NKX6-1P78426 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.1□□□□□ -0.15
NKX6-1P78426 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
NKX6-1P78426 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
NKX6-1P78426 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX6-1P78426 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms