Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TPM4P67936 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM4P67936 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM4P67936 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.92■□□□□ 0.46
TPM4P67936 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.92■□□□□ 0.46
TPM4P67936 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.92■□□□□ 0.46
TPM4P67936 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TPM4P67936 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.92■□□□□ 0.46
TPM4P67936 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM4P67936 RPS2P1-201ENST00000434010 821 ntBASIC17.92■□□□□ 0.46
TPM4P67936 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.92■□□□□ 0.46
TPM4P67936 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.92■□□□□ 0.46
TPM4P67936 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.92■□□□□ 0.46
TPM4P67936 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.92■□□□□ 0.46
TPM4P67936 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.92■□□□□ 0.46
TPM4P67936 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.92■□□□□ 0.46
TPM4P67936 AL356488.2-201ENST00000602755 427 ntBASIC17.92■□□□□ 0.46
TPM4P67936 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
TPM4P67936 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
TPM4P67936 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TPM4P67936 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM4P67936 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.92■□□□□ 0.46
TPM4P67936 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.92■□□□□ 0.46
TPM4P67936 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TPM4P67936 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM4P67936 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM4P67936 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TPM4P67936 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TPM4P67936 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM4P67936 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM4P67936 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.92■□□□□ 0.46
TPM4P67936 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM4P67936 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TPM4P67936 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.92■□□□□ 0.46
TPM4P67936 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM4P67936 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TPM4P67936 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TPM4P67936 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM4P67936 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
TPM4P67936 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM4P67936 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TPM4P67936 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM4P67936 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TPM4P67936 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
TPM4P67936 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM4P67936 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM4P67936 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM4P67936 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM4P67936 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.91■□□□□ 0.46
TPM4P67936 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TPM4P67936 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.91■□□□□ 0.46
TPM4P67936 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM4P67936 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM4P67936 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM4P67936 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.91■□□□□ 0.46
TPM4P67936 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.91■□□□□ 0.46
TPM4P67936 CXCL1P1-201ENST00000502804 216 ntBASIC17.91■□□□□ 0.46
TPM4P67936 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TPM4P67936 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TPM4P67936 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.91■□□□□ 0.46
TPM4P67936 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.91■□□□□ 0.46
TPM4P67936 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM4P67936 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TPM4P67936 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM4P67936 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM4P67936 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.91■□□□□ 0.46
TPM4P67936 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.91■□□□□ 0.46
TPM4P67936 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TPM4P67936 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TPM4P67936 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC17.91■□□□□ 0.46
TPM4P67936 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.9■□□□□ 0.46
TPM4P67936 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.9■□□□□ 0.46
TPM4P67936 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TPM4P67936 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM4P67936 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM4P67936 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM4P67936 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.9■□□□□ 0.46
TPM4P67936 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM4P67936 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM4P67936 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TPM4P67936 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
TPM4P67936 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.9■□□□□ 0.46
TPM4P67936 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.9■□□□□ 0.46
TPM4P67936 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM4P67936 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TPM4P67936 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM4P67936 TSPY19P-201ENST00000418461 509 ntBASIC17.9■□□□□ 0.46
TPM4P67936 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.9■□□□□ 0.46
TPM4P67936 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.9■□□□□ 0.46
TPM4P67936 TSPY18P-201ENST00000441642 509 ntBASIC17.9■□□□□ 0.46
TPM4P67936 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TPM4P67936 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.9■□□□□ 0.46
TPM4P67936 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.9■□□□□ 0.46
TPM4P67936 AL513480.1-201ENST00000451731 511 ntBASIC17.9■□□□□ 0.46
TPM4P67936 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.9■□□□□ 0.46
TPM4P67936 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.9■□□□□ 0.46
TPM4P67936 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.9■□□□□ 0.46
TPM4P67936 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.9■□□□□ 0.46
TPM4P67936 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TPM4P67936 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms