Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL353705.2-201ENST00000428243 662 ntBASIC14.28□□□□□ -0.12
CLRN1P58418 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.28□□□□□ -0.12
CLRN1P58418 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.28□□□□□ -0.12
CLRN1P58418 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.28□□□□□ -0.12
CLRN1P58418 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.28□□□□□ -0.12
CLRN1P58418 ALG1L8P-201ENST00000533887 760 ntBASIC14.28□□□□□ -0.12
CLRN1P58418 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.28□□□□□ -0.12
CLRN1P58418 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.28□□□□□ -0.12
CLRN1P58418 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.28□□□□□ -0.12
CLRN1P58418 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.28□□□□□ -0.12
CLRN1P58418 AC084121.4-201ENST00000641598 221 ntBASIC14.28□□□□□ -0.12
CLRN1P58418 AF228730.8-201ENST00000642140 221 ntBASIC14.28□□□□□ -0.12
CLRN1P58418 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.28□□□□□ -0.12
CLRN1P58418 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLRN1P58418 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.28□□□□□ -0.12
CLRN1P58418 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLRN1P58418 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLRN1P58418 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CLRN1P58418 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.27□□□□□ -0.12
CLRN1P58418 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.27□□□□□ -0.12
CLRN1P58418 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.27□□□□□ -0.12
CLRN1P58418 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CLRN1P58418 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
CLRN1P58418 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.27□□□□□ -0.12
CLRN1P58418 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.27□□□□□ -0.12
CLRN1P58418 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLRN1P58418 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.27□□□□□ -0.12
CLRN1P58418 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLRN1P58418 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLRN1P58418 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLRN1P58418 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CLRN1P58418 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.27□□□□□ -0.12
CLRN1P58418 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CLRN1P58418 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLRN1P58418 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLRN1P58418 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLRN1P58418 OR2I1P-209ENST00000641730 5365 ntBASIC14.27□□□□□ -0.12
CLRN1P58418 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLRN1P58418 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLRN1P58418 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CLRN1P58418 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLRN1P58418 AC004987.2-201ENST00000395959 1148 ntBASIC14.27□□□□□ -0.13
CLRN1P58418 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.27□□□□□ -0.13
CLRN1P58418 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.27□□□□□ -0.13
CLRN1P58418 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.27□□□□□ -0.13
CLRN1P58418 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLRN1P58418 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.27□□□□□ -0.13
CLRN1P58418 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.27□□□□□ -0.13
CLRN1P58418 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.27□□□□□ -0.13
CLRN1P58418 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.13
CLRN1P58418 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.27□□□□□ -0.13
CLRN1P58418 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CLRN1P58418 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLRN1P58418 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLRN1P58418 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLRN1P58418 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.27□□□□□ -0.13
CLRN1P58418 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CLRN1P58418 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.27□□□□□ -0.13
CLRN1P58418 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLRN1P58418 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CLRN1P58418 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CLRN1P58418 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CLRN1P58418 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLRN1P58418 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLRN1P58418 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLRN1P58418 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLRN1P58418 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.27□□□□□ -0.13
CLRN1P58418 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CLRN1P58418 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLRN1P58418 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLRN1P58418 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.27□□□□□ -0.13
CLRN1P58418 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLRN1P58418 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLRN1P58418 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CLRN1P58418 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CLRN1P58418 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.26□□□□□ -0.13
CLRN1P58418 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLRN1P58418 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLRN1P58418 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLRN1P58418 AC097376.2-205ENST00000610159 5334 ntBASIC14.26□□□□□ -0.13
CLRN1P58418 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLRN1P58418 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLRN1P58418 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.26□□□□□ -0.13
CLRN1P58418 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.26□□□□□ -0.13
CLRN1P58418 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLRN1P58418 RPS8P6-201ENST00000426177 609 ntBASIC14.26□□□□□ -0.13
CLRN1P58418 RBPMS2P1-201ENST00000437762 623 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms