Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LBX1P52954 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.57■□□□□ 0.4
LBX1P52954 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.57■□□□□ 0.4
LBX1P52954 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LBX1P52954 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.57■□□□□ 0.4
LBX1P52954 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LBX1P52954 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.57■□□□□ 0.4
LBX1P52954 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LBX1P52954 AC009053.2-201ENST00000563701 2365 ntBASIC17.57■□□□□ 0.4
LBX1P52954 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LBX1P52954 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LBX1P52954 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
LBX1P52954 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LBX1P52954 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.56■□□□□ 0.4
LBX1P52954 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LBX1P52954 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LBX1P52954 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LBX1P52954 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LBX1P52954 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LBX1P52954 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.56■□□□□ 0.4
LBX1P52954 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LBX1P52954 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC17.56■□□□□ 0.4
LBX1P52954 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.56■□□□□ 0.4
LBX1P52954 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.56■□□□□ 0.4
LBX1P52954 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC17.56■□□□□ 0.4
LBX1P52954 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LBX1P52954 MIR3677-201ENST00000578964 60 ntBASIC17.56■□□□□ 0.4
LBX1P52954 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.56■□□□□ 0.4
LBX1P52954 AL627230.2-201ENST00000613254 655 ntBASIC17.56■□□□□ 0.4
LBX1P52954 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LBX1P52954 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LBX1P52954 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LBX1P52954 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LBX1P52954 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.56■□□□□ 0.4
LBX1P52954 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.56■□□□□ 0.4
LBX1P52954 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LBX1P52954 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LBX1P52954 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LBX1P52954 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LBX1P52954 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LBX1P52954 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LBX1P52954 AC004554.1-201ENST00000422830 1468 ntBASIC17.56■□□□□ 0.4
LBX1P52954 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LBX1P52954 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.56■□□□□ 0.4
LBX1P52954 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LBX1P52954 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LBX1P52954 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LBX1P52954 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LBX1P52954 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
LBX1P52954 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.55■□□□□ 0.4
LBX1P52954 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LBX1P52954 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LBX1P52954 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LBX1P52954 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
LBX1P52954 AL645728.1-201ENST00000366221 2101 ntBASIC17.55■□□□□ 0.4
LBX1P52954 COX20P1-201ENST00000366529 357 ntBASIC17.55■□□□□ 0.4
LBX1P52954 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.55■□□□□ 0.4
LBX1P52954 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.55■□□□□ 0.4
LBX1P52954 AC023141.7-201ENST00000430646 407 ntBASIC17.55■□□□□ 0.4
LBX1P52954 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC17.55■□□□□ 0.4
LBX1P52954 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.55■□□□□ 0.4
LBX1P52954 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.55■□□□□ 0.4
LBX1P52954 AC008723.1-201ENST00000506922 207 ntBASIC17.55■□□□□ 0.4
LBX1P52954 AC106820.3-201ENST00000561653 397 ntBASIC17.55■□□□□ 0.4
LBX1P52954 AC100827.2-201ENST00000563214 1194 ntBASIC17.55■□□□□ 0.4
LBX1P52954 AL109837.1-201ENST00000603272 613 ntBASIC17.55■□□□□ 0.4
LBX1P52954 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.55■□□□□ 0.4
LBX1P52954 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LBX1P52954 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LBX1P52954 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.55■□□□□ 0.4
LBX1P52954 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.55■□□□□ 0.4
LBX1P52954 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LBX1P52954 LINC01144-201ENST00000626198 1710 ntBASIC17.55■□□□□ 0.4
LBX1P52954 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LBX1P52954 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LBX1P52954 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LBX1P52954 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LBX1P52954 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LBX1P52954 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LBX1P52954 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LBX1P52954 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LBX1P52954 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LBX1P52954 AC090502.4-201ENST00000551714 1386 ntBASIC17.54■□□□□ 0.4
LBX1P52954 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LBX1P52954 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LBX1P52954 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LBX1P52954 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LBX1P52954 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LBX1P52954 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LBX1P52954 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LBX1P52954 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LBX1P52954 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.54■□□□□ 0.4
LBX1P52954 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LBX1P52954 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LBX1P52954 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LBX1P52954 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC17.54■□□□□ 0.4
LBX1P52954 AC004837.1-201ENST00000446267 564 ntBASIC17.54■□□□□ 0.4
LBX1P52954 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC17.54■□□□□ 0.4
LBX1P52954 AC245100.5-201ENST00000452108 331 ntBASIC17.54■□□□□ 0.4
LBX1P52954 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms