Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.66□□□□□ -0.38
CDC34P49427 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.66□□□□□ -0.38
CDC34P49427 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.66□□□□□ -0.38
CDC34P49427 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CDC34P49427 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CDC34P49427 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
CDC34P49427 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC34P49427 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC34P49427 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CDC34P49427 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC34P49427 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CDC34P49427 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC34P49427 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CDC34P49427 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CDC34P49427 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC34P49427 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.65□□□□□ -0.38
CDC34P49427 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.65□□□□□ -0.38
CDC34P49427 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CDC34P49427 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.65□□□□□ -0.38
CDC34P49427 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.65□□□□□ -0.38
CDC34P49427 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CDC34P49427 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.65□□□□□ -0.38
CDC34P49427 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 AC063952.2-201ENST00000498792 1227 ntBASIC12.65□□□□□ -0.38
CDC34P49427 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC12.65□□□□□ -0.38
CDC34P49427 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC12.65□□□□□ -0.38
CDC34P49427 AL589182.2-201ENST00000619332 1049 ntBASIC12.65□□□□□ -0.38
CDC34P49427 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.65□□□□□ -0.38
CDC34P49427 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CDC34P49427 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CDC34P49427 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
CDC34P49427 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.65□□□□□ -0.38
CDC34P49427 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
CDC34P49427 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CDC34P49427 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CDC34P49427 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CDC34P49427 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CDC34P49427 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.39
CDC34P49427 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
CDC34P49427 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.65□□□□□ -0.39
CDC34P49427 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.64□□□□□ -0.39
CDC34P49427 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.64□□□□□ -0.39
CDC34P49427 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.64□□□□□ -0.39
CDC34P49427 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.64□□□□□ -0.39
CDC34P49427 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CDC34P49427 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CDC34P49427 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.64□□□□□ -0.39
CDC34P49427 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.64□□□□□ -0.39
CDC34P49427 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CDC34P49427 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.64□□□□□ -0.39
CDC34P49427 PPIH-202ENST00000372549 327 ntTSL 3 BASIC12.64□□□□□ -0.39
CDC34P49427 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.64□□□□□ -0.39
CDC34P49427 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.64□□□□□ -0.39
CDC34P49427 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.64□□□□□ -0.39
CDC34P49427 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.64□□□□□ -0.39
CDC34P49427 AC245100.5-201ENST00000452108 331 ntBASIC12.64□□□□□ -0.39
CDC34P49427 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CDC34P49427 TOB2P1-201ENST00000469761 992 ntBASIC12.64□□□□□ -0.39
CDC34P49427 AC107918.2-201ENST00000530817 355 ntBASIC12.64□□□□□ -0.39
CDC34P49427 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms