Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CSNK1A1P48729 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.21□□□□□ -0.13
CSNK1A1P48729 TSEN15P1-201ENST00000423257 515 ntBASIC14.21□□□□□ -0.13
CSNK1A1P48729 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.21□□□□□ -0.13
CSNK1A1P48729 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1A1P48729 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.21□□□□□ -0.13
CSNK1A1P48729 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.21□□□□□ -0.13
CSNK1A1P48729 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.21□□□□□ -0.13
CSNK1A1P48729 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CSNK1A1P48729 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CSNK1A1P48729 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.21□□□□□ -0.13
CSNK1A1P48729 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
CSNK1A1P48729 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.21□□□□□ -0.13
CSNK1A1P48729 AC007967.4-201ENST00000614700 386 ntBASIC14.21□□□□□ -0.13
CSNK1A1P48729 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.21□□□□□ -0.13
CSNK1A1P48729 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CSNK1A1P48729 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.21□□□□□ -0.13
CSNK1A1P48729 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1A1P48729 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CSNK1A1P48729 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CSNK1A1P48729 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CSNK1A1P48729 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.21□□□□□ -0.14
CSNK1A1P48729 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CSNK1A1P48729 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CSNK1A1P48729 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CSNK1A1P48729 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CSNK1A1P48729 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
CSNK1A1P48729 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1A1P48729 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1A1P48729 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1A1P48729 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1A1P48729 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1A1P48729 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1A1P48729 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1A1P48729 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1A1P48729 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.2□□□□□ -0.14
CSNK1A1P48729 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1A1P48729 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1A1P48729 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1A1P48729 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1A1P48729 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1A1P48729 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1A1P48729 AL035456.1-201ENST00000456064 1369 ntBASIC14.2□□□□□ -0.14
CSNK1A1P48729 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1A1P48729 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 REXO1L1P-202ENST00000608646 1974 ntBASIC14.2□□□□□ -0.14
CSNK1A1P48729 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1A1P48729 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1A1P48729 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CSNK1A1P48729 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1A1P48729 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSNK1A1P48729 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 KRT8P37-201ENST00000451609 1420 ntBASIC14.19□□□□□ -0.14
CSNK1A1P48729 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSNK1A1P48729 MTND6P24-201ENST00000440466 518 ntBASIC14.19□□□□□ -0.14
CSNK1A1P48729 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.19□□□□□ -0.14
CSNK1A1P48729 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.19□□□□□ -0.14
CSNK1A1P48729 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms