Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 REXO1L8P-201ENST00000604378 1897 ntBASIC13.19□□□□□ -0.3
SNCAP37840 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.19□□□□□ -0.3
SNCAP37840 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
SNCAP37840 AC126335.2-201ENST00000623362 4637 ntBASIC13.19□□□□□ -0.3
SNCAP37840 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SNCAP37840 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
SNCAP37840 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SNCAP37840 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SNCAP37840 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
SNCAP37840 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SNCAP37840 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNCAP37840 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
SNCAP37840 PMS2P1-201ENST00000431037 1228 ntBASIC13.19□□□□□ -0.3
SNCAP37840 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.19□□□□□ -0.3
SNCAP37840 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNCAP37840 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SNCAP37840 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.19□□□□□ -0.3
SNCAP37840 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.19□□□□□ -0.3
SNCAP37840 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.19□□□□□ -0.3
SNCAP37840 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.19□□□□□ -0.3
SNCAP37840 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.19□□□□□ -0.3
SNCAP37840 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.19□□□□□ -0.3
SNCAP37840 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNCAP37840 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNCAP37840 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNCAP37840 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SNCAP37840 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.19□□□□□ -0.3
SNCAP37840 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNCAP37840 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNCAP37840 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SNCAP37840 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SNCAP37840 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNCAP37840 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNCAP37840 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNCAP37840 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNCAP37840 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.18□□□□□ -0.3
SNCAP37840 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.18□□□□□ -0.3
SNCAP37840 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNCAP37840 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNCAP37840 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.18□□□□□ -0.3
SNCAP37840 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.18□□□□□ -0.3
SNCAP37840 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SNCAP37840 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNCAP37840 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNCAP37840 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNCAP37840 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNCAP37840 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNCAP37840 AC005912.2-201ENST00000619492 2400 ntBASIC13.18□□□□□ -0.3
SNCAP37840 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNCAP37840 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNCAP37840 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.18□□□□□ -0.3
SNCAP37840 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SNCAP37840 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.18□□□□□ -0.3
SNCAP37840 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNCAP37840 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNCAP37840 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.18□□□□□ -0.3
SNCAP37840 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SNCAP37840 AL445228.2-201ENST00000605589 952 ntBASIC13.18□□□□□ -0.3
SNCAP37840 MIR1199-201ENST00000621445 119 ntBASIC13.18□□□□□ -0.3
SNCAP37840 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SNCAP37840 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.18□□□□□ -0.3
SNCAP37840 AC006504.4-201ENST00000592118 1568 ntBASIC13.18□□□□□ -0.3
SNCAP37840 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SNCAP37840 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.18□□□□□ -0.3
SNCAP37840 AL390755.1-201ENST00000623716 2027 ntBASIC13.18□□□□□ -0.3
SNCAP37840 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SNCAP37840 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNCAP37840 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SNCAP37840 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SNCAP37840 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SNCAP37840 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNCAP37840 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SNCAP37840 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.18□□□□□ -0.3
SNCAP37840 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNCAP37840 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SNCAP37840 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SNCAP37840 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
SNCAP37840 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SNCAP37840 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SNCAP37840 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.17□□□□□ -0.3
SNCAP37840 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SNCAP37840 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SNCAP37840 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SNCAP37840 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.17□□□□□ -0.3
SNCAP37840 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.17□□□□□ -0.3
SNCAP37840 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SNCAP37840 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNCAP37840 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SNCAP37840 ELK2BP-201ENST00000415014 1224 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms