Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC138951.2-201ENST00000623455 1161 ntBASIC17.11■□□□□ 0.33
HOXC8P31273 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.11■□□□□ 0.33
HOXC8P31273 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.11■□□□□ 0.33
HOXC8P31273 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC8P31273 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC8P31273 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC8P31273 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HOXC8P31273 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
HOXC8P31273 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
HOXC8P31273 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC8P31273 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.11■□□□□ 0.33
HOXC8P31273 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC8P31273 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXC8P31273 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HOXC8P31273 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC8P31273 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HOXC8P31273 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
HOXC8P31273 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC8P31273 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
HOXC8P31273 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC8P31273 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC8P31273 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC8P31273 MIR1247-201ENST00000408206 136 ntBASIC17.1■□□□□ 0.33
HOXC8P31273 KLF2P2-201ENST00000416807 1039 ntBASIC17.1■□□□□ 0.33
HOXC8P31273 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.1■□□□□ 0.33
HOXC8P31273 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC8P31273 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.1■□□□□ 0.33
HOXC8P31273 LINC02447-202ENST00000501888 2146 ntBASIC17.1■□□□□ 0.33
HOXC8P31273 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXC8P31273 RNA5SP486-201ENST00000515961 83 ntBASIC17.1■□□□□ 0.33
HOXC8P31273 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.1■□□□□ 0.33
HOXC8P31273 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.1■□□□□ 0.33
HOXC8P31273 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.1■□□□□ 0.33
HOXC8P31273 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.1■□□□□ 0.33
HOXC8P31273 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.1■□□□□ 0.33
HOXC8P31273 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXC8P31273 AC006453.4-201ENST00000636949 1252 ntBASIC17.1■□□□□ 0.33
HOXC8P31273 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC8P31273 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC8P31273 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXC8P31273 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC8P31273 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC8P31273 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXC8P31273 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC8P31273 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC8P31273 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HOXC8P31273 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXC8P31273 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC8P31273 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXC8P31273 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXC8P31273 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC8P31273 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXC8P31273 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXC8P31273 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC8P31273 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HOXC8P31273 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC8P31273 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HOXC8P31273 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HOXC8P31273 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC8P31273 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXC8P31273 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXC8P31273 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXC8P31273 AC114812.1-204ENST00000449669 728 ntBASIC17.09■□□□□ 0.33
HOXC8P31273 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC8P31273 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.09■□□□□ 0.33
HOXC8P31273 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC8P31273 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.09■□□□□ 0.33
HOXC8P31273 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXC8P31273 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXC8P31273 AHCYP2-201ENST00000430630 1300 ntBASIC17.09■□□□□ 0.33
HOXC8P31273 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXC8P31273 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HOXC8P31273 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC8P31273 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC8P31273 AC112504.1-201ENST00000623415 1841 ntBASIC17.09■□□□□ 0.33
HOXC8P31273 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXC8P31273 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
HOXC8P31273 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC8P31273 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HOXC8P31273 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
HOXC8P31273 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HOXC8P31273 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HOXC8P31273 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HOXC8P31273 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
HOXC8P31273 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC8P31273 AC022188.1-201ENST00000620960 1664 ntBASIC17.08■□□□□ 0.32
HOXC8P31273 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC8P31273 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC8P31273 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC8P31273 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC8P31273 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC8P31273 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC8P31273 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC8P31273 GPAA1P2-201ENST00000417923 928 ntBASIC17.08■□□□□ 0.32
HOXC8P31273 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.08■□□□□ 0.32
HOXC8P31273 AC099548.2-209ENST00000480264 625 ntBASIC17.08■□□□□ 0.32
HOXC8P31273 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC8P31273 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC8P31273 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC8P31273 RN7SL48P-201ENST00000579283 293 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms