Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.36■□□□□ 0.85
RXRBP28702 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RXRBP28702 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RXRBP28702 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RXRBP28702 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RXRBP28702 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.36■□□□□ 0.85
RXRBP28702 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RXRBP28702 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RXRBP28702 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RXRBP28702 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RXRBP28702 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RXRBP28702 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RXRBP28702 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.35■□□□□ 0.85
RXRBP28702 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RXRBP28702 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RXRBP28702 SOD2-202ENST00000367054 815 ntTSL 2 BASIC20.35■□□□□ 0.85
RXRBP28702 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RXRBP28702 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC20.35■□□□□ 0.85
RXRBP28702 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RXRBP28702 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC20.35■□□□□ 0.85
RXRBP28702 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC20.35■□□□□ 0.85
RXRBP28702 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC20.35■□□□□ 0.85
RXRBP28702 MIR6816-201ENST00000620368 66 ntBASIC20.35■□□□□ 0.85
RXRBP28702 AC073592.2-201ENST00000623062 780 ntBASIC20.35■□□□□ 0.85
RXRBP28702 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RXRBP28702 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RXRBP28702 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RXRBP28702 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RXRBP28702 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RXRBP28702 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RXRBP28702 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RXRBP28702 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RXRBP28702 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.35■□□□□ 0.85
RXRBP28702 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RXRBP28702 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
RXRBP28702 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
RXRBP28702 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.35■□□□□ 0.85
RXRBP28702 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RXRBP28702 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RXRBP28702 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC20.35■□□□□ 0.85
RXRBP28702 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RXRBP28702 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC20.34■□□□□ 0.85
RXRBP28702 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RXRBP28702 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RXRBP28702 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RXRBP28702 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RXRBP28702 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.34■□□□□ 0.85
RXRBP28702 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RXRBP28702 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.34■□□□□ 0.85
RXRBP28702 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RXRBP28702 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RXRBP28702 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RXRBP28702 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RXRBP28702 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC20.34■□□□□ 0.85
RXRBP28702 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC20.34■□□□□ 0.85
RXRBP28702 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC20.34■□□□□ 0.85
RXRBP28702 AREG-202ENST00000502307 956 ntTSL 5 BASIC20.34■□□□□ 0.85
RXRBP28702 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC20.34■□□□□ 0.85
RXRBP28702 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC20.34■□□□□ 0.85
RXRBP28702 AC009779.1-201ENST00000551138 283 ntBASIC20.34■□□□□ 0.85
RXRBP28702 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RXRBP28702 AC100827.2-201ENST00000563214 1194 ntBASIC20.34■□□□□ 0.85
RXRBP28702 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
RXRBP28702 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.34■□□□□ 0.85
RXRBP28702 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RXRBP28702 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RXRBP28702 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RXRBP28702 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RXRBP28702 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.34■□□□□ 0.85
RXRBP28702 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.34■□□□□ 0.85
RXRBP28702 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.34■□□□□ 0.85
RXRBP28702 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RXRBP28702 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.34■□□□□ 0.85
RXRBP28702 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RXRBP28702 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RXRBP28702 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RXRBP28702 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
RXRBP28702 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RXRBP28702 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RXRBP28702 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RXRBP28702 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RXRBP28702 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.33■□□□□ 0.85
RXRBP28702 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RXRBP28702 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
RXRBP28702 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
RXRBP28702 AC239868.1-201ENST00000369385 493 ntBASIC20.33■□□□□ 0.85
RXRBP28702 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RXRBP28702 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RXRBP28702 HNRNPA1P58-201ENST00000403629 610 ntBASIC20.33■□□□□ 0.85
RXRBP28702 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC20.33■□□□□ 0.85
RXRBP28702 AC008723.1-201ENST00000506922 207 ntBASIC20.33■□□□□ 0.85
RXRBP28702 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC20.33■□□□□ 0.85
RXRBP28702 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC20.33■□□□□ 0.85
RXRBP28702 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RXRBP28702 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RXRBP28702 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RXRBP28702 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RXRBP28702 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.32■□□□□ 0.84
RXRBP28702 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RXRBP28702 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms