Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN2P17655 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.4■□□□□ 0.54
CAPN2P17655 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.4■□□□□ 0.54
CAPN2P17655 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN2P17655 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC18.4■□□□□ 0.54
CAPN2P17655 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.4■□□□□ 0.54
CAPN2P17655 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.4■□□□□ 0.54
CAPN2P17655 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CAPN2P17655 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.4■□□□□ 0.54
CAPN2P17655 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.4■□□□□ 0.54
CAPN2P17655 AL109936.8-201ENST00000641772 604 ntBASIC18.4■□□□□ 0.54
CAPN2P17655 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN2P17655 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN2P17655 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.4■□□□□ 0.54
CAPN2P17655 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN2P17655 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN2P17655 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN2P17655 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.4■□□□□ 0.54
CAPN2P17655 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN2P17655 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN2P17655 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN2P17655 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN2P17655 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.4■□□□□ 0.54
CAPN2P17655 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CAPN2P17655 AC079328.2-201ENST00000561241 3354 ntBASIC18.39■□□□□ 0.54
CAPN2P17655 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.39■□□□□ 0.54
CAPN2P17655 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN2P17655 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CAPN2P17655 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CAPN2P17655 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN2P17655 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN2P17655 MIR1908-201ENST00000410394 80 ntBASIC18.39■□□□□ 0.53
CAPN2P17655 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN2P17655 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.39■□□□□ 0.53
CAPN2P17655 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.39■□□□□ 0.53
CAPN2P17655 BNIP3P42-201ENST00000454982 569 ntBASIC18.39■□□□□ 0.53
CAPN2P17655 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CAPN2P17655 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CAPN2P17655 AC104596.2-201ENST00000512793 793 ntBASIC18.39■□□□□ 0.53
CAPN2P17655 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.39■□□□□ 0.53
CAPN2P17655 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.39■□□□□ 0.53
CAPN2P17655 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.39■□□□□ 0.53
CAPN2P17655 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.39■□□□□ 0.53
CAPN2P17655 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.39■□□□□ 0.53
CAPN2P17655 BNIP3P29-201ENST00000598302 571 ntBASIC18.39■□□□□ 0.53
CAPN2P17655 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.39■□□□□ 0.53
CAPN2P17655 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.39■□□□□ 0.53
CAPN2P17655 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.39■□□□□ 0.53
CAPN2P17655 AC011447.5-201ENST00000616168 564 ntBASIC18.39■□□□□ 0.53
CAPN2P17655 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.39■□□□□ 0.53
CAPN2P17655 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN2P17655 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.39■□□□□ 0.53
CAPN2P17655 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN2P17655 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN2P17655 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.39■□□□□ 0.53
CAPN2P17655 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN2P17655 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN2P17655 AC073439.1-201ENST00000624121 1774 ntBASIC18.39■□□□□ 0.53
CAPN2P17655 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN2P17655 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN2P17655 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.39■□□□□ 0.53
CAPN2P17655 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.39■□□□□ 0.53
CAPN2P17655 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CAPN2P17655 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN2P17655 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.39■□□□□ 0.53
CAPN2P17655 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CAPN2P17655 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.39■□□□□ 0.53
CAPN2P17655 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN2P17655 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN2P17655 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CAPN2P17655 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN2P17655 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CAPN2P17655 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN2P17655 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN2P17655 AC133963.1-201ENST00000504166 1679 ntBASIC18.38■□□□□ 0.53
CAPN2P17655 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CAPN2P17655 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN2P17655 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN2P17655 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN2P17655 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN2P17655 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN2P17655 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN2P17655 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN2P17655 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CAPN2P17655 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN2P17655 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN2P17655 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN2P17655 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
CAPN2P17655 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN2P17655 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.38■□□□□ 0.53
CAPN2P17655 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN2P17655 PFN1P12-201ENST00000455938 534 ntBASIC18.38■□□□□ 0.53
CAPN2P17655 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN2P17655 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN2P17655 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN2P17655 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN2P17655 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN2P17655 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN2P17655 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN2P17655 SNX29P1-201ENST00000548357 1007 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms