Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYN1P17600 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.12■□□□□ 0.33
SYN1P17600 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYN1P17600 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYN1P17600 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.12■□□□□ 0.33
SYN1P17600 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SYN1P17600 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SYN1P17600 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SYN1P17600 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYN1P17600 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.12■□□□□ 0.33
SYN1P17600 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.12■□□□□ 0.33
SYN1P17600 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYN1P17600 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYN1P17600 PKD1P1-201ENST00000458669 6805 ntBASIC17.11■□□□□ 0.33
SYN1P17600 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYN1P17600 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.11■□□□□ 0.33
SYN1P17600 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SYN1P17600 AC234644.1-201ENST00000406065 370 ntBASIC17.11■□□□□ 0.33
SYN1P17600 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC17.11■□□□□ 0.33
SYN1P17600 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYN1P17600 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.11■□□□□ 0.33
SYN1P17600 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.11■□□□□ 0.33
SYN1P17600 KRT18P66-201ENST00000452970 1269 ntBASIC17.11■□□□□ 0.33
SYN1P17600 AC012618.1-201ENST00000461223 412 ntBASIC17.11■□□□□ 0.33
SYN1P17600 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.11■□□□□ 0.33
SYN1P17600 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SYN1P17600 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.11■□□□□ 0.33
SYN1P17600 AC005730.2-201ENST00000564549 1184 ntBASIC17.11■□□□□ 0.33
SYN1P17600 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC17.11■□□□□ 0.33
SYN1P17600 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
SYN1P17600 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SYN1P17600 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYN1P17600 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.11■□□□□ 0.33
SYN1P17600 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.11■□□□□ 0.33
SYN1P17600 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.11■□□□□ 0.33
SYN1P17600 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYN1P17600 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYN1P17600 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYN1P17600 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.1■□□□□ 0.33
SYN1P17600 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.1■□□□□ 0.33
SYN1P17600 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYN1P17600 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SYN1P17600 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYN1P17600 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYN1P17600 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.1■□□□□ 0.33
SYN1P17600 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYN1P17600 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYN1P17600 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYN1P17600 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYN1P17600 TPM3P8-201ENST00000330554 643 ntBASIC17.1■□□□□ 0.33
SYN1P17600 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYN1P17600 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SYN1P17600 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.1■□□□□ 0.33
SYN1P17600 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.1■□□□□ 0.33
SYN1P17600 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SYN1P17600 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.1■□□□□ 0.33
SYN1P17600 AC079178.1-201ENST00000420915 656 ntBASIC17.1■□□□□ 0.33
SYN1P17600 PHKG1P2-201ENST00000457537 863 ntBASIC17.1■□□□□ 0.33
SYN1P17600 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.1■□□□□ 0.33
SYN1P17600 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SYN1P17600 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.1■□□□□ 0.33
SYN1P17600 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.1■□□□□ 0.33
SYN1P17600 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SYN1P17600 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SYN1P17600 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.1■□□□□ 0.33
SYN1P17600 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYN1P17600 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.1■□□□□ 0.33
SYN1P17600 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.1■□□□□ 0.33
SYN1P17600 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SYN1P17600 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYN1P17600 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYN1P17600 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.1■□□□□ 0.33
SYN1P17600 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.1■□□□□ 0.33
SYN1P17600 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.09■□□□□ 0.33
SYN1P17600 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SYN1P17600 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.09■□□□□ 0.33
SYN1P17600 AC141586.5-201ENST00000624546 2050 ntBASIC17.09■□□□□ 0.33
SYN1P17600 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYN1P17600 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYN1P17600 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYN1P17600 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SYN1P17600 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.09■□□□□ 0.33
SYN1P17600 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC17.09■□□□□ 0.33
SYN1P17600 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.09■□□□□ 0.33
SYN1P17600 AC022217.1-201ENST00000521069 738 ntBASIC17.09■□□□□ 0.33
SYN1P17600 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.09■□□□□ 0.33
SYN1P17600 AC073352.2-201ENST00000609385 439 ntBASIC17.09■□□□□ 0.33
SYN1P17600 AF254983.2-201ENST00000612331 135 ntBASIC17.09■□□□□ 0.33
SYN1P17600 AC244157.2-201ENST00000616239 1006 ntBASIC17.09■□□□□ 0.33
SYN1P17600 AC011491.1-203ENST00000637688 543 ntBASIC17.09■□□□□ 0.33
SYN1P17600 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYN1P17600 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYN1P17600 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYN1P17600 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.09■□□□□ 0.33
SYN1P17600 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYN1P17600 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYN1P17600 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYN1P17600 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYN1P17600 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYN1P17600 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms