Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.49■□□□□ 0.87
MS4A1P11836 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A1P11836 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC20.49■□□□□ 0.87
MS4A1P11836 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
MS4A1P11836 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A1P11836 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A1P11836 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.48■□□□□ 0.87
MS4A1P11836 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC20.48■□□□□ 0.87
MS4A1P11836 C1R-202ENST00000536053 2347 ntTSL 2 BASIC20.48■□□□□ 0.87
MS4A1P11836 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
MS4A1P11836 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A1P11836 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC20.48■□□□□ 0.87
MS4A1P11836 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC20.48■□□□□ 0.87
MS4A1P11836 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
MS4A1P11836 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
MS4A1P11836 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A1P11836 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A1P11836 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.48■□□□□ 0.87
MS4A1P11836 ALG1L5P-201ENST00000482043 771 ntBASIC20.48■□□□□ 0.87
MS4A1P11836 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A1P11836 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.48■□□□□ 0.87
MS4A1P11836 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.48■□□□□ 0.87
MS4A1P11836 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC20.48■□□□□ 0.87
MS4A1P11836 AC105339.1-204ENST00000636249 355 ntBASIC20.48■□□□□ 0.87
MS4A1P11836 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A1P11836 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A1P11836 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A1P11836 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC20.48■□□□□ 0.87
MS4A1P11836 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
MS4A1P11836 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A1P11836 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A1P11836 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A1P11836 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.48■□□□□ 0.87
MS4A1P11836 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC20.48■□□□□ 0.87
MS4A1P11836 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MS4A1P11836 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC20.48■□□□□ 0.87
MS4A1P11836 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A1P11836 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A1P11836 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
MS4A1P11836 AP3S2-216ENST00000617003 1561 ntBASIC20.47■□□□□ 0.87
MS4A1P11836 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A1P11836 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A1P11836 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.47■□□□□ 0.87
MS4A1P11836 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
MS4A1P11836 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A1P11836 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A1P11836 AC069335.1-201ENST00000489972 472 ntBASIC20.47■□□□□ 0.87
MS4A1P11836 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
MS4A1P11836 YBX1P5-201ENST00000509441 847 ntBASIC20.47■□□□□ 0.87
MS4A1P11836 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.47■□□□□ 0.87
MS4A1P11836 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.47■□□□□ 0.87
MS4A1P11836 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.47■□□□□ 0.87
MS4A1P11836 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.47■□□□□ 0.87
MS4A1P11836 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.47■□□□□ 0.87
MS4A1P11836 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.47■□□□□ 0.87
MS4A1P11836 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.47■□□□□ 0.87
MS4A1P11836 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A1P11836 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A1P11836 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A1P11836 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
MS4A1P11836 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
MS4A1P11836 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A1P11836 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A1P11836 GSN-206ENST00000394353 2311 ntTSL 2 BASIC20.47■□□□□ 0.87
MS4A1P11836 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC20.47■□□□□ 0.87
MS4A1P11836 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC20.47■□□□□ 0.87
MS4A1P11836 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MS4A1P11836 BNIP3P1-202ENST00000550043 1585 ntBASIC20.46■□□□□ 0.87
MS4A1P11836 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC20.46■□□□□ 0.87
MS4A1P11836 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A1P11836 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A1P11836 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
MS4A1P11836 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
MS4A1P11836 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
MS4A1P11836 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.46■□□□□ 0.87
MS4A1P11836 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC20.46■□□□□ 0.87
MS4A1P11836 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
MS4A1P11836 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A1P11836 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A1P11836 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
MS4A1P11836 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A1P11836 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A1P11836 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A1P11836 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
MS4A1P11836 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.46■□□□□ 0.87
MS4A1P11836 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.46■□□□□ 0.87
MS4A1P11836 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.46■□□□□ 0.87
MS4A1P11836 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.46■□□□□ 0.87
MS4A1P11836 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.46■□□□□ 0.87
MS4A1P11836 SLC25A39P2-201ENST00000537614 270 ntBASIC20.46■□□□□ 0.87
MS4A1P11836 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.46■□□□□ 0.87
MS4A1P11836 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A1P11836 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A1P11836 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
MS4A1P11836 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
MS4A1P11836 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A1P11836 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
MS4A1P11836 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC20.46■□□□□ 0.87
MS4A1P11836 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC20.46■□□□□ 0.87
MS4A1P11836 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms