Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 Z93015.1-201ENST00000451718 390 ntBASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 AC097359.3-201ENST00000603982 1210 ntBASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 CYP2AB1P-202ENST00000454440 1456 ntBASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CSB-PGBD3P0DP91 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 PFN2-215ENST00000497148 743 ntTSL 4 BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 AC078819.1-201ENST00000547454 765 ntBASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 AC012085.1-201ENST00000548270 765 ntBASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 HNRNPA1P48-202ENST00000565308 961 ntBASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 ARL16-210ENST00000574938 751 ntTSL 2 BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 MIR4741-201ENST00000579822 90 ntBASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 TP73-209ENST00000603362 1668 ntTSL 5 BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 PRKN-211ENST00000615065 261 ntTSL 5 BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CSB-PGBD3P0DP91 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 SLC25A24P2-201ENST00000415059 510 ntBASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC20.9■□□□□ 0.94
CSB-PGBD3P0DP91 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms