Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TPM2P07951 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.23■□□□□ 0.51
TPM2P07951 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TPM2P07951 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM2P07951 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM2P07951 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
TPM2P07951 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TPM2P07951 PMS2P1-201ENST00000431037 1228 ntBASIC18.23■□□□□ 0.51
TPM2P07951 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.23■□□□□ 0.51
TPM2P07951 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.23■□□□□ 0.51
TPM2P07951 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM2P07951 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TPM2P07951 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TPM2P07951 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TPM2P07951 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM2P07951 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM2P07951 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TPM2P07951 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM2P07951 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TPM2P07951 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
TPM2P07951 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TPM2P07951 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TPM2P07951 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC18.22■□□□□ 0.51
TPM2P07951 AC020658.6-201ENST00000623564 1870 ntBASIC18.22■□□□□ 0.51
TPM2P07951 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TPM2P07951 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TPM2P07951 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 LINC02447-202ENST00000501888 2146 ntBASIC18.22■□□□□ 0.51
TPM2P07951 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
TPM2P07951 RPS15P9-201ENST00000494093 319 ntBASIC18.22■□□□□ 0.51
TPM2P07951 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.22■□□□□ 0.51
TPM2P07951 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.22■□□□□ 0.51
TPM2P07951 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.22■□□□□ 0.51
TPM2P07951 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.22■□□□□ 0.51
TPM2P07951 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.22■□□□□ 0.51
TPM2P07951 AC025062.2-201ENST00000605477 670 ntBASIC18.22■□□□□ 0.51
TPM2P07951 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.22■□□□□ 0.51
TPM2P07951 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 AC107918.4-202ENST00000641623 219 ntBASIC18.22■□□□□ 0.51
TPM2P07951 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TPM2P07951 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
TPM2P07951 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.22■□□□□ 0.51
TPM2P07951 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.22■□□□□ 0.51
TPM2P07951 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TPM2P07951 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
TPM2P07951 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.22■□□□□ 0.51
TPM2P07951 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.22■□□□□ 0.51
TPM2P07951 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TPM2P07951 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.22■□□□□ 0.51
TPM2P07951 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TPM2P07951 AC013726.1-201ENST00000563747 2285 ntBASIC18.21■□□□□ 0.51
TPM2P07951 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TPM2P07951 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM2P07951 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TPM2P07951 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TPM2P07951 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TPM2P07951 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM2P07951 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.21■□□□□ 0.51
TPM2P07951 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
TPM2P07951 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.21■□□□□ 0.51
TPM2P07951 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM2P07951 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM2P07951 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM2P07951 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TPM2P07951 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TPM2P07951 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.21■□□□□ 0.51
TPM2P07951 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.21■□□□□ 0.51
TPM2P07951 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.21■□□□□ 0.51
TPM2P07951 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.21■□□□□ 0.51
TPM2P07951 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
TPM2P07951 AC021087.4-201ENST00000563761 564 ntBASIC18.21■□□□□ 0.51
TPM2P07951 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.21■□□□□ 0.51
TPM2P07951 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms