Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
CHGBP05060 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.04■□□□□ 0.64
CHGBP05060 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.04■□□□□ 0.64
CHGBP05060 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHGBP05060 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CHGBP05060 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHGBP05060 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHGBP05060 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CHGBP05060 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.04■□□□□ 0.64
CHGBP05060 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHGBP05060 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHGBP05060 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CHGBP05060 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHGBP05060 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHGBP05060 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHGBP05060 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC19.03■□□□□ 0.64
CHGBP05060 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHGBP05060 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHGBP05060 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHGBP05060 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.03■□□□□ 0.64
CHGBP05060 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC19.03■□□□□ 0.64
CHGBP05060 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.03■□□□□ 0.64
CHGBP05060 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHGBP05060 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.03■□□□□ 0.64
CHGBP05060 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CHGBP05060 AC009118.2-201ENST00000613275 655 ntBASIC19.03■□□□□ 0.64
CHGBP05060 AL158212.4-201ENST00000624062 1286 ntBASIC19.03■□□□□ 0.64
CHGBP05060 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.03■□□□□ 0.64
CHGBP05060 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CHGBP05060 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.03■□□□□ 0.64
CHGBP05060 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
CHGBP05060 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.03■□□□□ 0.64
CHGBP05060 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.03■□□□□ 0.64
CHGBP05060 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC19.03■□□□□ 0.64
CHGBP05060 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHGBP05060 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHGBP05060 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.03■□□□□ 0.64
CHGBP05060 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHGBP05060 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CHGBP05060 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHGBP05060 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.03■□□□□ 0.64
CHGBP05060 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHGBP05060 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHGBP05060 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHGBP05060 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC19.02■□□□□ 0.64
CHGBP05060 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
CHGBP05060 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CHGBP05060 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHGBP05060 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.02■□□□□ 0.64
CHGBP05060 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CHGBP05060 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.02■□□□□ 0.64
CHGBP05060 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.02■□□□□ 0.64
CHGBP05060 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC19.02■□□□□ 0.64
CHGBP05060 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHGBP05060 AC022188.1-201ENST00000620960 1664 ntBASIC19.02■□□□□ 0.64
CHGBP05060 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHGBP05060 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.02■□□□□ 0.64
CHGBP05060 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHGBP05060 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHGBP05060 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHGBP05060 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHGBP05060 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHGBP05060 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.02■□□□□ 0.64
CHGBP05060 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.02■□□□□ 0.64
CHGBP05060 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.02■□□□□ 0.64
CHGBP05060 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC19.02■□□□□ 0.64
CHGBP05060 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.02■□□□□ 0.64
CHGBP05060 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.02■□□□□ 0.64
CHGBP05060 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHGBP05060 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CHGBP05060 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CHGBP05060 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.02■□□□□ 0.64
CHGBP05060 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CHGBP05060 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.02■□□□□ 0.63
CHGBP05060 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHGBP05060 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHGBP05060 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHGBP05060 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CHGBP05060 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHGBP05060 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.02■□□□□ 0.63
CHGBP05060 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHGBP05060 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHGBP05060 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC19.01■□□□□ 0.63
CHGBP05060 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CHGBP05060 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.01■□□□□ 0.63
CHGBP05060 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CHGBP05060 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.01■□□□□ 0.63
CHGBP05060 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHGBP05060 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.01■□□□□ 0.63
CHGBP05060 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CHGBP05060 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHGBP05060 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
CHGBP05060 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHGBP05060 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHGBP05060 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CHGBP05060 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CHGBP05060 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHGBP05060 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.01■□□□□ 0.63
CHGBP05060 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.01■□□□□ 0.63
CHGBP05060 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms