Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.31■□□□□ 0.2
MT-ND3P03897 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.31■□□□□ 0.2
MT-ND3P03897 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MT-ND3P03897 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.31■□□□□ 0.2
MT-ND3P03897 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.31■□□□□ 0.2
MT-ND3P03897 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.31■□□□□ 0.2
MT-ND3P03897 AC021097.1-201ENST00000607902 574 ntBASIC16.31■□□□□ 0.2
MT-ND3P03897 AL513190.1-201ENST00000621254 727 ntBASIC16.31■□□□□ 0.2
MT-ND3P03897 AC010507.1-201ENST00000633895 436 ntBASIC16.31■□□□□ 0.2
MT-ND3P03897 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
MT-ND3P03897 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
MT-ND3P03897 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.31■□□□□ 0.2
MT-ND3P03897 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.31■□□□□ 0.2
MT-ND3P03897 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.31■□□□□ 0.2
MT-ND3P03897 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.31■□□□□ 0.2
MT-ND3P03897 AC087481.3-201ENST00000602886 1894 ntBASIC16.31■□□□□ 0.2
MT-ND3P03897 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-ND3P03897 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.31■□□□□ 0.2
MT-ND3P03897 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
MT-ND3P03897 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.3■□□□□ 0.2
MT-ND3P03897 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.3■□□□□ 0.2
MT-ND3P03897 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND3P03897 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.3■□□□□ 0.2
MT-ND3P03897 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.3■□□□□ 0.2
MT-ND3P03897 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MT-ND3P03897 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND3P03897 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.3■□□□□ 0.2
MT-ND3P03897 AL109954.1-202ENST00000564051 2148 ntBASIC16.3■□□□□ 0.2
MT-ND3P03897 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND3P03897 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND3P03897 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND3P03897 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND3P03897 ELL2P1-201ENST00000413990 1906 ntBASIC16.3■□□□□ 0.2
MT-ND3P03897 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MT-ND3P03897 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND3P03897 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
MT-ND3P03897 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND3P03897 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.3■□□□□ 0.2
MT-ND3P03897 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND3P03897 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.3■□□□□ 0.2
MT-ND3P03897 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND3P03897 AC074386.1-202ENST00000463561 864 ntBASIC16.3■□□□□ 0.2
MT-ND3P03897 CXCL1P1-201ENST00000502804 216 ntBASIC16.3■□□□□ 0.2
MT-ND3P03897 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND3P03897 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.3■□□□□ 0.2
MT-ND3P03897 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.3■□□□□ 0.2
MT-ND3P03897 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.3■□□□□ 0.2
MT-ND3P03897 KRT19P2-202ENST00000557173 1012 ntBASIC16.3■□□□□ 0.2
MT-ND3P03897 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.3■□□□□ 0.2
MT-ND3P03897 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND3P03897 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND3P03897 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.3■□□□□ 0.2
MT-ND3P03897 AL596442.2-201ENST00000610240 980 ntBASIC16.3■□□□□ 0.2
MT-ND3P03897 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND3P03897 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND3P03897 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND3P03897 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND3P03897 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
MT-ND3P03897 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
MT-ND3P03897 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MT-ND3P03897 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.3■□□□□ 0.2
MT-ND3P03897 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND3P03897 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.29■□□□□ 0.2
MT-ND3P03897 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND3P03897 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND3P03897 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.29■□□□□ 0.2
MT-ND3P03897 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.29■□□□□ 0.2
MT-ND3P03897 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND3P03897 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.29■□□□□ 0.2
MT-ND3P03897 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND3P03897 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND3P03897 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
MT-ND3P03897 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND3P03897 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND3P03897 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND3P03897 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND3P03897 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND3P03897 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.29■□□□□ 0.2
MT-ND3P03897 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
MT-ND3P03897 CEND1P1-201ENST00000451006 455 ntBASIC16.29■□□□□ 0.2
MT-ND3P03897 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.29■□□□□ 0.2
MT-ND3P03897 ALG1L5P-201ENST00000482043 771 ntBASIC16.29■□□□□ 0.2
MT-ND3P03897 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.29■□□□□ 0.2
MT-ND3P03897 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
MT-ND3P03897 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
MT-ND3P03897 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.29■□□□□ 0.2
MT-ND3P03897 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND3P03897 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND3P03897 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-ND3P03897 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.29■□□□□ 0.2
MT-ND3P03897 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms