Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 AC008677.1-201ENST00000519230 1561 ntBASIC14.38□□□□□ -0.11
HLA-DQA2P01906 IL9RP2-201ENST00000423948 1312 ntBASIC14.38□□□□□ -0.11
HLA-DQA2P01906 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DQA2P01906 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 AL590627.1-203ENST00000421194 1026 ntBASIC14.37□□□□□ -0.11
HLA-DQA2P01906 AC245100.5-201ENST00000452108 331 ntBASIC14.37□□□□□ -0.11
HLA-DQA2P01906 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQA2P01906 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 PDPK2P-202ENST00000562415 1191 ntBASIC14.36□□□□□ -0.11
HLA-DQA2P01906 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 AC002347.1-201ENST00000569543 541 ntBASIC14.36□□□□□ -0.11
HLA-DQA2P01906 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQA2P01906 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms