Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.54□□□□□ -0.4
TOMM40O96008 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.54□□□□□ -0.4
TOMM40O96008 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.54□□□□□ -0.4
TOMM40O96008 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.54□□□□□ -0.4
TOMM40O96008 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.54□□□□□ -0.4
TOMM40O96008 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.54□□□□□ -0.4
TOMM40O96008 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.54□□□□□ -0.4
TOMM40O96008 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TOMM40O96008 KRT19P2-202ENST00000557173 1012 ntBASIC12.54□□□□□ -0.4
TOMM40O96008 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.54□□□□□ -0.4
TOMM40O96008 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.54□□□□□ -0.4
TOMM40O96008 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.54□□□□□ -0.4
TOMM40O96008 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 AC023908.3-201ENST00000564211 3047 ntBASIC12.54□□□□□ -0.4
TOMM40O96008 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.54□□□□□ -0.4
TOMM40O96008 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.54□□□□□ -0.4
TOMM40O96008 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.54□□□□□ -0.4
TOMM40O96008 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.54□□□□□ -0.4
TOMM40O96008 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
TOMM40O96008 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.54□□□□□ -0.4
TOMM40O96008 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TOMM40O96008 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.54□□□□□ -0.4
TOMM40O96008 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TOMM40O96008 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.53□□□□□ -0.4
TOMM40O96008 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
TOMM40O96008 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.53□□□□□ -0.4
TOMM40O96008 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.53□□□□□ -0.4
TOMM40O96008 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 KRT126P-201ENST00000549467 1181 ntBASIC12.53□□□□□ -0.4
TOMM40O96008 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.53□□□□□ -0.4
TOMM40O96008 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 AC145285.3-201ENST00000564603 959 ntBASIC12.53□□□□□ -0.4
TOMM40O96008 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 AC068137.2-201ENST00000605408 478 ntBASIC12.53□□□□□ -0.4
TOMM40O96008 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.53□□□□□ -0.4
TOMM40O96008 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 HLA-A-201ENST00000376802 1334 ntBASIC12.53□□□□□ -0.4
TOMM40O96008 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
TOMM40O96008 AL365209.1-201ENST00000624418 6473 ntBASIC12.53□□□□□ -0.4
TOMM40O96008 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.53□□□□□ -0.4
TOMM40O96008 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TOMM40O96008 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms