Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFPL1O75677 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFPL1O75677 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RFPL1O75677 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RFPL1O75677 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
RFPL1O75677 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
RFPL1O75677 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.02■□□□□ 0.15
RFPL1O75677 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.01■□□□□ 0.15
RFPL1O75677 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RFPL1O75677 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RFPL1O75677 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.01■□□□□ 0.15
RFPL1O75677 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.01■□□□□ 0.15
RFPL1O75677 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.01■□□□□ 0.15
RFPL1O75677 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.01■□□□□ 0.15
RFPL1O75677 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.01■□□□□ 0.15
RFPL1O75677 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.01■□□□□ 0.15
RFPL1O75677 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
RFPL1O75677 AL513210.1-201ENST00000629608 234 ntBASIC16.01■□□□□ 0.15
RFPL1O75677 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RFPL1O75677 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
RFPL1O75677 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RFPL1O75677 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.01■□□□□ 0.15
RFPL1O75677 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.01■□□□□ 0.15
RFPL1O75677 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.01■□□□□ 0.15
RFPL1O75677 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 AC018892.3-201ENST00000623986 2499 ntBASIC16.01■□□□□ 0.15
RFPL1O75677 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RFPL1O75677 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFPL1O75677 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RFPL1O75677 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16■□□□□ 0.15
RFPL1O75677 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
RFPL1O75677 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFPL1O75677 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16■□□□□ 0.15
RFPL1O75677 ILF3-AS1-201ENST00000591501 1983 ntBASIC16■□□□□ 0.15
RFPL1O75677 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RFPL1O75677 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RFPL1O75677 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16■□□□□ 0.15
RFPL1O75677 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RFPL1O75677 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
RFPL1O75677 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16■□□□□ 0.15
RFPL1O75677 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFPL1O75677 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFPL1O75677 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16■□□□□ 0.15
RFPL1O75677 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16■□□□□ 0.15
RFPL1O75677 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16■□□□□ 0.15
RFPL1O75677 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16■□□□□ 0.15
RFPL1O75677 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RFPL1O75677 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFPL1O75677 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFPL1O75677 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RFPL1O75677 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16■□□□□ 0.15
RFPL1O75677 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16■□□□□ 0.15
RFPL1O75677 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFPL1O75677 SPCS2P1-201ENST00000561636 679 ntBASIC16■□□□□ 0.15
RFPL1O75677 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16■□□□□ 0.15
RFPL1O75677 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16■□□□□ 0.15
RFPL1O75677 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16■□□□□ 0.15
RFPL1O75677 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RFPL1O75677 MED16-214ENST00000617672 554 ntTSL 5 BASIC16■□□□□ 0.15
RFPL1O75677 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16■□□□□ 0.15
RFPL1O75677 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFPL1O75677 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFPL1O75677 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16■□□□□ 0.15
RFPL1O75677 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16■□□□□ 0.15
RFPL1O75677 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFPL1O75677 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16■□□□□ 0.15
RFPL1O75677 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16■□□□□ 0.15
RFPL1O75677 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RFPL1O75677 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16■□□□□ 0.15
RFPL1O75677 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
RFPL1O75677 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RFPL1O75677 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RFPL1O75677 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFPL1O75677 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RFPL1O75677 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.99■□□□□ 0.15
RFPL1O75677 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RFPL1O75677 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms