Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.21□□□□□ -0.13
PFDN1O60925 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
PFDN1O60925 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
PFDN1O60925 POU5F1P6-201ENST00000466990 990 ntBASIC14.21□□□□□ -0.13
PFDN1O60925 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN1O60925 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PFDN1O60925 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.21□□□□□ -0.13
PFDN1O60925 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.21□□□□□ -0.13
PFDN1O60925 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.21□□□□□ -0.13
PFDN1O60925 AC131212.4-201ENST00000623606 975 ntBASIC14.21□□□□□ -0.13
PFDN1O60925 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC14.21□□□□□ -0.13
PFDN1O60925 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN1O60925 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN1O60925 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PFDN1O60925 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN1O60925 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PFDN1O60925 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
PFDN1O60925 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.21□□□□□ -0.14
PFDN1O60925 AC011477.6-201ENST00000604980 1927 ntBASIC14.21□□□□□ -0.14
PFDN1O60925 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PFDN1O60925 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
PFDN1O60925 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PFDN1O60925 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
PFDN1O60925 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PFDN1O60925 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN1O60925 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PFDN1O60925 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN1O60925 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PFDN1O60925 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC14.2□□□□□ -0.14
PFDN1O60925 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN1O60925 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
PFDN1O60925 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN1O60925 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN1O60925 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN1O60925 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN1O60925 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.2□□□□□ -0.14
PFDN1O60925 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN1O60925 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
PFDN1O60925 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN1O60925 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN1O60925 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PFDN1O60925 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN1O60925 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.2□□□□□ -0.14
PFDN1O60925 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.2□□□□□ -0.14
PFDN1O60925 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN1O60925 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.2□□□□□ -0.14
PFDN1O60925 CKBP1-201ENST00000565489 1086 ntBASIC14.2□□□□□ -0.14
PFDN1O60925 AC008687.5-201ENST00000593746 558 ntBASIC14.2□□□□□ -0.14
PFDN1O60925 AC005837.3-201ENST00000612163 286 ntBASIC14.2□□□□□ -0.14
PFDN1O60925 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.2□□□□□ -0.14
PFDN1O60925 AL139011.1-202ENST00000642063 584 ntBASIC14.2□□□□□ -0.14
PFDN1O60925 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN1O60925 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.2□□□□□ -0.14
PFDN1O60925 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN1O60925 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN1O60925 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PFDN1O60925 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN1O60925 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PFDN1O60925 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
PFDN1O60925 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN1O60925 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN1O60925 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PFDN1O60925 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN1O60925 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PFDN1O60925 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PFDN1O60925 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.19□□□□□ -0.14
PFDN1O60925 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PFDN1O60925 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PFDN1O60925 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PFDN1O60925 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.19□□□□□ -0.14
PFDN1O60925 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC14.19□□□□□ -0.14
PFDN1O60925 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PFDN1O60925 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PFDN1O60925 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PFDN1O60925 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
PFDN1O60925 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PFDN1O60925 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PFDN1O60925 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.19□□□□□ -0.14
PFDN1O60925 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.19□□□□□ -0.14
PFDN1O60925 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PFDN1O60925 HOXB1-202ENST00000577092 1414 ntBASIC14.19□□□□□ -0.14
PFDN1O60925 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PFDN1O60925 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PFDN1O60925 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.19□□□□□ -0.14
PFDN1O60925 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
PFDN1O60925 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.19□□□□□ -0.14
PFDN1O60925 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PFDN1O60925 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.19□□□□□ -0.14
PFDN1O60925 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.19□□□□□ -0.14
PFDN1O60925 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PFDN1O60925 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PFDN1O60925 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PFDN1O60925 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PFDN1O60925 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PFDN1O60925 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
PFDN1O60925 AC126365.1-201ENST00000578585 1514 ntBASIC14.19□□□□□ -0.14
PFDN1O60925 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PFDN1O60925 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC14.19□□□□□ -0.14
PFDN1O60925 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PFDN1O60925 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms