Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.53□□□□□ -0.4
CUBNO60494 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
CUBNO60494 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CUBNO60494 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
CUBNO60494 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.52□□□□□ -0.4
CUBNO60494 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CUBNO60494 IQSEC3P1-201ENST00000538799 536 ntBASIC12.52□□□□□ -0.4
CUBNO60494 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
CUBNO60494 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.52□□□□□ -0.4
CUBNO60494 AC141586.1-203ENST00000567242 366 ntBASIC12.52□□□□□ -0.4
CUBNO60494 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CUBNO60494 AC008132.1-202ENST00000342005 1389 ntBASIC12.52□□□□□ -0.4
CUBNO60494 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CUBNO60494 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CUBNO60494 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.52□□□□□ -0.4
CUBNO60494 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CUBNO60494 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.4
CUBNO60494 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.52□□□□□ -0.4
CUBNO60494 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC12.52□□□□□ -0.4
CUBNO60494 AC136604.1-201ENST00000418535 575 ntBASIC12.52□□□□□ -0.4
CUBNO60494 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.4
CUBNO60494 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CUBNO60494 RN7SL736P-201ENST00000613111 269 ntBASIC12.52□□□□□ -0.4
CUBNO60494 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.52□□□□□ -0.4
CUBNO60494 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CUBNO60494 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.52□□□□□ -0.41
CUBNO60494 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CUBNO60494 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CUBNO60494 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.52□□□□□ -0.41
CUBNO60494 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CUBNO60494 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CUBNO60494 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.52□□□□□ -0.41
CUBNO60494 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
CUBNO60494 TUBB8P12-201ENST00000308911 1335 ntBASIC12.52□□□□□ -0.41
CUBNO60494 TUBB7P-202ENST00000428444 1305 ntBASIC12.52□□□□□ -0.41
CUBNO60494 TUBB8P7-204ENST00000567960 1332 ntBASIC12.52□□□□□ -0.41
CUBNO60494 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CUBNO60494 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
CUBNO60494 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.52□□□□□ -0.41
CUBNO60494 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CUBNO60494 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.52□□□□□ -0.41
CUBNO60494 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CUBNO60494 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CUBNO60494 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CUBNO60494 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.52□□□□□ -0.41
CUBNO60494 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CUBNO60494 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CUBNO60494 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CUBNO60494 RNA5SP486-201ENST00000515961 83 ntBASIC12.52□□□□□ -0.41
CUBNO60494 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.52□□□□□ -0.41
CUBNO60494 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.52□□□□□ -0.41
CUBNO60494 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.52□□□□□ -0.41
CUBNO60494 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC12.52□□□□□ -0.41
CUBNO60494 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.52□□□□□ -0.41
CUBNO60494 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
CUBNO60494 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC12.52□□□□□ -0.41
CUBNO60494 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC12.52□□□□□ -0.41
CUBNO60494 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.52□□□□□ -0.41
CUBNO60494 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.52□□□□□ -0.41
CUBNO60494 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CUBNO60494 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.52□□□□□ -0.41
CUBNO60494 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CUBNO60494 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CUBNO60494 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CUBNO60494 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CUBNO60494 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CUBNO60494 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.51□□□□□ -0.41
CUBNO60494 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.51□□□□□ -0.41
CUBNO60494 AP003171.2-201ENST00000528208 925 ntBASIC12.51□□□□□ -0.41
CUBNO60494 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC12.51□□□□□ -0.41
CUBNO60494 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CUBNO60494 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.51□□□□□ -0.41
CUBNO60494 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.51□□□□□ -0.41
CUBNO60494 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC12.51□□□□□ -0.41
CUBNO60494 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CUBNO60494 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC12.51□□□□□ -0.41
CUBNO60494 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
CUBNO60494 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CUBNO60494 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.51□□□□□ -0.41
CUBNO60494 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.51□□□□□ -0.41
CUBNO60494 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC12.51□□□□□ -0.41
CUBNO60494 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC12.51□□□□□ -0.41
CUBNO60494 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CUBNO60494 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms