Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 HNRNPUP1-201ENST00000554987 333 ntBASIC15.23■□□□□ 0.03
LCMT2O60294 AC010336.2-201ENST00000564226 506 ntBASIC15.23■□□□□ 0.03
LCMT2O60294 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LCMT2O60294 AL844908.2-201ENST00000609461 460 ntBASIC15.23■□□□□ 0.03
LCMT2O60294 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.23■□□□□ 0.03
LCMT2O60294 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.23■□□□□ 0.03
LCMT2O60294 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.23■□□□□ 0.03
LCMT2O60294 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
LCMT2O60294 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LCMT2O60294 CICP13-201ENST00000422015 2789 ntBASIC15.23■□□□□ 0.03
LCMT2O60294 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LCMT2O60294 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCMT2O60294 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCMT2O60294 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCMT2O60294 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LCMT2O60294 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCMT2O60294 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCMT2O60294 AC068418.2-201ENST00000577309 3703 ntBASIC15.22■□□□□ 0.03
LCMT2O60294 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LCMT2O60294 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.22■□□□□ 0.03
LCMT2O60294 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCMT2O60294 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LCMT2O60294 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LCMT2O60294 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LCMT2O60294 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.22■□□□□ 0.03
LCMT2O60294 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.22■□□□□ 0.03
LCMT2O60294 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.22■□□□□ 0.03
LCMT2O60294 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LCMT2O60294 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LCMT2O60294 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.22■□□□□ 0.03
LCMT2O60294 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.22■□□□□ 0.03
LCMT2O60294 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.22■□□□□ 0.03
LCMT2O60294 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LCMT2O60294 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
LCMT2O60294 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.22■□□□□ 0.03
LCMT2O60294 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
LCMT2O60294 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.22■□□□□ 0.03
LCMT2O60294 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LCMT2O60294 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LCMT2O60294 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LCMT2O60294 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCMT2O60294 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCMT2O60294 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LCMT2O60294 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.22■□□□□ 0.03
LCMT2O60294 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LCMT2O60294 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.22■□□□□ 0.03
LCMT2O60294 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCMT2O60294 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCMT2O60294 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LCMT2O60294 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.22■□□□□ 0.03
LCMT2O60294 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.22■□□□□ 0.03
LCMT2O60294 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LCMT2O60294 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCMT2O60294 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCMT2O60294 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.22■□□□□ 0.03
LCMT2O60294 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.22■□□□□ 0.03
LCMT2O60294 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LCMT2O60294 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCMT2O60294 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.21■□□□□ 0.03
LCMT2O60294 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LCMT2O60294 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LCMT2O60294 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.21■□□□□ 0.03
LCMT2O60294 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCMT2O60294 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCMT2O60294 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCMT2O60294 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCMT2O60294 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LCMT2O60294 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCMT2O60294 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCMT2O60294 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCMT2O60294 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCMT2O60294 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.21■□□□□ 0.03
LCMT2O60294 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
LCMT2O60294 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LCMT2O60294 AL607033.1-201ENST00000623900 1599 ntBASIC15.21■□□□□ 0.03
LCMT2O60294 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.21■□□□□ 0.03
LCMT2O60294 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LCMT2O60294 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.21■□□□□ 0.03
LCMT2O60294 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LCMT2O60294 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.21■□□□□ 0.03
LCMT2O60294 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.21■□□□□ 0.03
LCMT2O60294 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.21■□□□□ 0.03
LCMT2O60294 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.21■□□□□ 0.03
LCMT2O60294 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.21■□□□□ 0.03
LCMT2O60294 TARDBPP1-201ENST00000442013 1203 ntBASIC15.21■□□□□ 0.03
LCMT2O60294 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.21■□□□□ 0.03
LCMT2O60294 SERBP1P3-201ENST00000459980 809 ntBASIC15.21■□□□□ 0.03
LCMT2O60294 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LCMT2O60294 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms