Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
NDUFA1O15239 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
NDUFA1O15239 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
NDUFA1O15239 AC073648.2-201ENST00000510116 352 ntBASIC10.96□□□□□ -0.65
NDUFA1O15239 NMU-205ENST00000511469 756 ntTSL 3 BASIC10.96□□□□□ -0.65
NDUFA1O15239 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC10.96□□□□□ -0.65
NDUFA1O15239 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC10.96□□□□□ -0.65
NDUFA1O15239 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
NDUFA1O15239 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC10.96□□□□□ -0.65
NDUFA1O15239 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
NDUFA1O15239 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
NDUFA1O15239 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
NDUFA1O15239 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
NDUFA1O15239 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
NDUFA1O15239 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
NDUFA1O15239 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
NDUFA1O15239 POLL-206ENST00000370172 2308 ntTSL 2 BASIC10.96□□□□□ -0.66
NDUFA1O15239 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
NDUFA1O15239 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
NDUFA1O15239 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC10.96□□□□□ -0.66
NDUFA1O15239 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
NDUFA1O15239 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
NDUFA1O15239 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC10.96□□□□□ -0.66
NDUFA1O15239 AC090616.6-203ENST00000579186 1945 ntBASIC10.96□□□□□ -0.66
NDUFA1O15239 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
NDUFA1O15239 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
NDUFA1O15239 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC10.95□□□□□ -0.66
NDUFA1O15239 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 AC006504.4-201ENST00000592118 1568 ntBASIC10.95□□□□□ -0.66
NDUFA1O15239 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC10.95□□□□□ -0.66
NDUFA1O15239 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
NDUFA1O15239 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC10.95□□□□□ -0.66
NDUFA1O15239 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
NDUFA1O15239 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC10.95□□□□□ -0.66
NDUFA1O15239 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC10.95□□□□□ -0.66
NDUFA1O15239 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC10.95□□□□□ -0.66
NDUFA1O15239 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC10.95□□□□□ -0.66
NDUFA1O15239 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
NDUFA1O15239 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
NDUFA1O15239 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
NDUFA1O15239 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC10.95□□□□□ -0.66
NDUFA1O15239 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
NDUFA1O15239 TSPY19P-201ENST00000418461 509 ntBASIC10.95□□□□□ -0.66
NDUFA1O15239 PMS2P1-201ENST00000431037 1228 ntBASIC10.95□□□□□ -0.66
NDUFA1O15239 TSPY18P-201ENST00000441642 509 ntBASIC10.95□□□□□ -0.66
NDUFA1O15239 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC10.95□□□□□ -0.66
NDUFA1O15239 RPS15P9-201ENST00000494093 319 ntBASIC10.95□□□□□ -0.66
NDUFA1O15239 SLC25A6P2-201ENST00000497974 877 ntBASIC10.95□□□□□ -0.66
NDUFA1O15239 AC136632.2-201ENST00000512891 861 ntBASIC10.95□□□□□ -0.66
NDUFA1O15239 OR7E14P-202ENST00000530490 1290 ntBASIC10.95□□□□□ -0.66
NDUFA1O15239 PNMT-203ENST00000581428 677 ntTSL 2 BASIC10.95□□□□□ -0.66
NDUFA1O15239 AC107918.4-202ENST00000641623 219 ntBASIC10.95□□□□□ -0.66
NDUFA1O15239 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 AC105250.1-201ENST00000509378 2057 ntBASIC10.95□□□□□ -0.66
NDUFA1O15239 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
NDUFA1O15239 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
NDUFA1O15239 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
NDUFA1O15239 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
NDUFA1O15239 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC10.95□□□□□ -0.66
NDUFA1O15239 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC10.95□□□□□ -0.66
NDUFA1O15239 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC10.95□□□□□ -0.66
NDUFA1O15239 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
NDUFA1O15239 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
NDUFA1O15239 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
NDUFA1O15239 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 AC011477.6-201ENST00000604980 1927 ntBASIC10.94□□□□□ -0.66
NDUFA1O15239 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
NDUFA1O15239 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC10.94□□□□□ -0.66
NDUFA1O15239 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
NDUFA1O15239 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
NDUFA1O15239 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms