Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.83■□□□□ 0.12
TBC1D3FA6NER0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 AC112492.5-201ENST00000421897 457 ntBASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 MIR6752-201ENST00000618442 71 ntBASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3FA6NER0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 ACA64.2-201ENST00000459014 129 ntBASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 AC099398.1-201ENST00000567919 2776 ntBASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 AC133539.2-201ENST00000604757 467 ntBASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TBC1D3FA6NER0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3FA6NER0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms