Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 AJ011931.1-201ENST00000618749 2492 ntBASIC16.94■□□□□ 0.3
RCCD1A6NED2 AL390755.1-201ENST00000623716 2027 ntBASIC16.94■□□□□ 0.3
RCCD1A6NED2 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCCD1A6NED2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RCCD1A6NED2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCCD1A6NED2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RCCD1A6NED2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.94■□□□□ 0.3
RCCD1A6NED2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCCD1A6NED2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RCCD1A6NED2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCCD1A6NED2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCCD1A6NED2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 RPS8P6-201ENST00000426177 609 ntBASIC16.94■□□□□ 0.3
RCCD1A6NED2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 AP001005.1-201ENST00000571755 1248 ntBASIC16.94■□□□□ 0.3
RCCD1A6NED2 AL513190.1-201ENST00000621254 727 ntBASIC16.94■□□□□ 0.3
RCCD1A6NED2 AL161645.1-201ENST00000622716 1255 ntBASIC16.94■□□□□ 0.3
RCCD1A6NED2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCCD1A6NED2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCCD1A6NED2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCCD1A6NED2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCCD1A6NED2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCCD1A6NED2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCCD1A6NED2 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCCD1A6NED2 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCCD1A6NED2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCCD1A6NED2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCCD1A6NED2 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCCD1A6NED2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.94■□□□□ 0.3
RCCD1A6NED2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RCCD1A6NED2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RCCD1A6NED2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.93■□□□□ 0.3
RCCD1A6NED2 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 FGD5P1-202ENST00000614866 2498 ntBASIC16.93■□□□□ 0.3
RCCD1A6NED2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.93■□□□□ 0.3
RCCD1A6NED2 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 LST1-206ENST00000376090 689 ntTSL 2 BASIC16.93■□□□□ 0.3
RCCD1A6NED2 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 LST1-209ENST00000376096 565 ntTSL 2 BASIC16.93■□□□□ 0.3
RCCD1A6NED2 LST1-210ENST00000376099 610 ntTSL 2 BASIC16.93■□□□□ 0.3
RCCD1A6NED2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.93■□□□□ 0.3
RCCD1A6NED2 LST1-214ENST00000418507 726 ntTSL 2 BASIC16.93■□□□□ 0.3
RCCD1A6NED2 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.93■□□□□ 0.3
RCCD1A6NED2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 AC068137.2-201ENST00000605408 478 ntBASIC16.93■□□□□ 0.3
RCCD1A6NED2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.93■□□□□ 0.3
RCCD1A6NED2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.93■□□□□ 0.3
RCCD1A6NED2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RCCD1A6NED2 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RCCD1A6NED2 HLA-A-201ENST00000376802 1334 ntBASIC16.93■□□□□ 0.3
RCCD1A6NED2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RCCD1A6NED2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
RCCD1A6NED2 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RCCD1A6NED2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RCCD1A6NED2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RCCD1A6NED2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.92■□□□□ 0.3
RCCD1A6NED2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.92■□□□□ 0.3
RCCD1A6NED2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms