Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 PRYP6-201ENST00000514804 343 ntBASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC069120.2-201ENST00000524091 540 ntBASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC140878.1-201ENST00000565277 250 ntBASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC003101.2-201ENST00000612557 442 ntBASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AL592424.1-201ENST00000563624 1536 ntBASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TCRBV4S1A1TA0A5B7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC092850.2-201ENST00000623821 2697 ntBASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TREML5P-201ENST00000421694 576 ntBASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC022532.1-201ENST00000624563 1728 ntBASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.87□□□□□ -0.35
TCRBV4S1A1TA0A5B7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 FO538757.1-201ENST00000623083 1397 ntBASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 AC005622.1-201ENST00000636801 1703 ntBASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TCRBV4S1A1TA0A5B7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms