Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 AL033527.5-201ENST00000641382 801 ntBASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 CLK3P2-201ENST00000427566 1453 ntBASIC15.59■□□□□ 0.09
CSNK1G3Q9Y6M4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
CSNK1G3Q9Y6M4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
CSNK1G3Q9Y6M4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
CSNK1G3Q9Y6M4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CSNK1G3Q9Y6M4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CSNK1G3Q9Y6M4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.58■□□□□ 0.09
CSNK1G3Q9Y6M4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 AZGP1P1-201ENST00000411909 902 ntBASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 AC112492.5-201ENST00000421897 457 ntBASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 RPL13P2-201ENST00000440687 659 ntBASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 AC036164.1-201ENST00000570544 333 ntBASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 AC015936.2-201ENST00000593177 259 ntBASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 AL391069.4-201ENST00000609583 481 ntBASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CSNK1G3Q9Y6M4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 AL662844.4-201ENST00000606367 2838 ntBASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSNK1G3Q9Y6M4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms