Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
R3HCC1Q9Y3T6 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 PTENP1-202ENST00000532280 3996 ntBASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 AC007967.2-201ENST00000432613 625 ntBASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 FRMD8P1-201ENST00000440433 1524 ntBASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 KRT18P3-201ENST00000451602 1288 ntBASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 AL109954.1-202ENST00000564051 2148 ntBASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 FAM197Y3-203ENST00000618346 717 ntBASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
R3HCC1Q9Y3T6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 AC107918.4-201ENST00000641966 3141 ntBASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 MIR600HG-201ENST00000449175 5984 ntBASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
R3HCC1Q9Y3T6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 CICP23-201ENST00000605013 2741 ntBASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
R3HCC1Q9Y3T6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms