Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC19.09■□□□□ 0.65
ZC3H4Q9UPT8 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC19.09■□□□□ 0.65
ZC3H4Q9UPT8 AC145423.3-201ENST00000615987 467 ntBASIC19.09■□□□□ 0.65
ZC3H4Q9UPT8 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H4Q9UPT8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
ZC3H4Q9UPT8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H4Q9UPT8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H4Q9UPT8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ZC3H4Q9UPT8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H4Q9UPT8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H4Q9UPT8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.09■□□□□ 0.65
ZC3H4Q9UPT8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H4Q9UPT8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
ZC3H4Q9UPT8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H4Q9UPT8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZC3H4Q9UPT8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 PCDHB17P-201ENST00000539533 2393 ntBASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 CNN2P10-201ENST00000443067 918 ntBASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 SPTLC1P5-201ENST00000450718 252 ntBASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 AC134698.3-201ENST00000523880 214 ntBASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 PRKXP1-201ENST00000561423 1122 ntBASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
ZC3H4Q9UPT8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H4Q9UPT8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H4Q9UPT8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H4Q9UPT8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H4Q9UPT8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H4Q9UPT8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H4Q9UPT8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.08■□□□□ 0.64
ZC3H4Q9UPT8 AC046158.3-201ENST00000624947 2558 ntBASIC19.08■□□□□ 0.64
ZC3H4Q9UPT8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H4Q9UPT8 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H4Q9UPT8 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H4Q9UPT8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
ZC3H4Q9UPT8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ZC3H4Q9UPT8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
ZC3H4Q9UPT8 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 PCGF3-213ENST00000620529 1899 ntBASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 SDCCAG3P2-201ENST00000326105 1023 ntBASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 SNX21-203ENST00000372541 771 ntTSL 2 BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 AC114501.1-201ENST00000445949 172 ntBASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 AC107373.2-201ENST00000607735 490 ntBASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZC3H4Q9UPT8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC19.06■□□□□ 0.64
ZC3H4Q9UPT8 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms