Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 AL079307.3-201ENST00000556114 283 ntBASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 AL589739.1-201ENST00000607720 493 ntBASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 AC093028.1-201ENST00000622998 982 ntBASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.54■□□□□ 0.24
AP4E1Q9UPM8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 KRT8P12-202ENST00000472924 1397 ntBASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 TUBB3P1-201ENST00000405796 1332 ntBASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 CETN4P-206ENST00000642099 2168 ntBASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 HYMAI-201ENST00000635591 3347 ntBASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 HNRNPUP1-201ENST00000554987 333 ntBASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 MIR4313-201ENST00000580760 101 ntBASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 AC006538.3-201ENST00000612495 578 ntBASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 AC092850.2-201ENST00000623821 2697 ntBASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP4E1Q9UPM8 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP4E1Q9UPM8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
AP4E1Q9UPM8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
AP4E1Q9UPM8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP4E1Q9UPM8 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
AP4E1Q9UPM8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
AP4E1Q9UPM8 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP4E1Q9UPM8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.52■□□□□ 0.24
AP4E1Q9UPM8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP4E1Q9UPM8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP4E1Q9UPM8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP4E1Q9UPM8 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP4E1Q9UPM8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP4E1Q9UPM8 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.52■□□□□ 0.24
AP4E1Q9UPM8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
AP4E1Q9UPM8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
AP4E1Q9UPM8 METTL21AP1-201ENST00000438852 635 ntBASIC16.52■□□□□ 0.24
AP4E1Q9UPM8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.52■□□□□ 0.24
AP4E1Q9UPM8 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP4E1Q9UPM8 AC125807.1-201ENST00000483097 614 ntBASIC16.52■□□□□ 0.24
AP4E1Q9UPM8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms