Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP25Q9UHP3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.33■□□□□ 0.52
USP25Q9UHP3 AC002347.1-201ENST00000569543 541 ntBASIC18.33■□□□□ 0.52
USP25Q9UHP3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP25Q9UHP3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.33■□□□□ 0.52
USP25Q9UHP3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.33■□□□□ 0.52
USP25Q9UHP3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP25Q9UHP3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP25Q9UHP3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.33■□□□□ 0.52
USP25Q9UHP3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
USP25Q9UHP3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
USP25Q9UHP3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC18.33■□□□□ 0.52
USP25Q9UHP3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.33■□□□□ 0.52
USP25Q9UHP3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.33■□□□□ 0.52
USP25Q9UHP3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP25Q9UHP3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP25Q9UHP3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP25Q9UHP3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP25Q9UHP3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP25Q9UHP3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP25Q9UHP3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP25Q9UHP3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP25Q9UHP3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP25Q9UHP3 WASH6P-202ENST00000359512 1437 ntBASIC18.32■□□□□ 0.52
USP25Q9UHP3 AC104109.2-201ENST00000602919 1418 ntBASIC18.32■□□□□ 0.52
USP25Q9UHP3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
USP25Q9UHP3 AC073439.1-201ENST00000624121 1774 ntBASIC18.32■□□□□ 0.52
USP25Q9UHP3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP25Q9UHP3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP25Q9UHP3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP25Q9UHP3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
USP25Q9UHP3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP25Q9UHP3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.32■□□□□ 0.52
USP25Q9UHP3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP25Q9UHP3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP25Q9UHP3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP25Q9UHP3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
USP25Q9UHP3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP25Q9UHP3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP25Q9UHP3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP25Q9UHP3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.32■□□□□ 0.52
USP25Q9UHP3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.32■□□□□ 0.52
USP25Q9UHP3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
USP25Q9UHP3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.32■□□□□ 0.52
USP25Q9UHP3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.32■□□□□ 0.52
USP25Q9UHP3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.32■□□□□ 0.52
USP25Q9UHP3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
USP25Q9UHP3 AC087481.3-201ENST00000602886 1894 ntBASIC18.32■□□□□ 0.52
USP25Q9UHP3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP25Q9UHP3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.32■□□□□ 0.52
USP25Q9UHP3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
USP25Q9UHP3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP25Q9UHP3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP25Q9UHP3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP25Q9UHP3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC18.32■□□□□ 0.52
USP25Q9UHP3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP25Q9UHP3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP25Q9UHP3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP25Q9UHP3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP25Q9UHP3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP25Q9UHP3 CICP23-201ENST00000605013 2741 ntBASIC18.31■□□□□ 0.52
USP25Q9UHP3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP25Q9UHP3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP25Q9UHP3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP25Q9UHP3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP25Q9UHP3 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP25Q9UHP3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 AL589702.1-201ENST00000641229 1509 ntBASIC18.31■□□□□ 0.52
USP25Q9UHP3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP25Q9UHP3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP25Q9UHP3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP25Q9UHP3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP25Q9UHP3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP25Q9UHP3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP25Q9UHP3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP25Q9UHP3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP25Q9UHP3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP25Q9UHP3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.31■□□□□ 0.52
USP25Q9UHP3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP25Q9UHP3 CICP4-201ENST00000447359 2812 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms