Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.81■□□□□ 0.28
TLR9Q9NR96 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TLR9Q9NR96 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TLR9Q9NR96 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TLR9Q9NR96 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.81■□□□□ 0.28
TLR9Q9NR96 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TLR9Q9NR96 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.81■□□□□ 0.28
TLR9Q9NR96 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
TLR9Q9NR96 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.8■□□□□ 0.28
TLR9Q9NR96 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 AC093433.1-201ENST00000458048 571 ntBASIC16.8■□□□□ 0.28
TLR9Q9NR96 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 AC243960.2-201ENST00000600996 747 ntBASIC16.8■□□□□ 0.28
TLR9Q9NR96 AC005252.2-201ENST00000624630 1141 ntBASIC16.8■□□□□ 0.28
TLR9Q9NR96 RHOXF1P1-202ENST00000635473 501 ntBASIC16.8■□□□□ 0.28
TLR9Q9NR96 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TLR9Q9NR96 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TLR9Q9NR96 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.79■□□□□ 0.28
TLR9Q9NR96 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.79■□□□□ 0.28
TLR9Q9NR96 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.79■□□□□ 0.28
TLR9Q9NR96 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 PHKG1P2-201ENST00000457537 863 ntBASIC16.79■□□□□ 0.28
TLR9Q9NR96 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.79■□□□□ 0.28
TLR9Q9NR96 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 KRT90P-201ENST00000549264 1064 ntBASIC16.79■□□□□ 0.28
TLR9Q9NR96 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TLR9Q9NR96 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.79■□□□□ 0.28
TLR9Q9NR96 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.79■□□□□ 0.28
TLR9Q9NR96 AC244669.2-201ENST00000612320 853 ntBASIC16.79■□□□□ 0.28
TLR9Q9NR96 AC009542.2-202ENST00000619004 1067 ntBASIC16.79■□□□□ 0.28
TLR9Q9NR96 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.79■□□□□ 0.28
TLR9Q9NR96 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
TLR9Q9NR96 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TLR9Q9NR96 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.79■□□□□ 0.28
TLR9Q9NR96 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.79■□□□□ 0.28
TLR9Q9NR96 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms