Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.3■□□□□ 0.36
HIPK3Q9H422 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HIPK3Q9H422 AC046158.3-201ENST00000624947 2558 ntBASIC17.3■□□□□ 0.36
HIPK3Q9H422 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.3■□□□□ 0.36
HIPK3Q9H422 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.3■□□□□ 0.36
HIPK3Q9H422 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HIPK3Q9H422 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK3Q9H422 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK3Q9H422 ELK2AP-201ENST00000392510 1007 ntBASIC17.3■□□□□ 0.36
HIPK3Q9H422 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HIPK3Q9H422 SLC25A24P2-201ENST00000415059 510 ntBASIC17.3■□□□□ 0.36
HIPK3Q9H422 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.3■□□□□ 0.36
HIPK3Q9H422 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.3■□□□□ 0.36
HIPK3Q9H422 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK3Q9H422 Z93015.1-201ENST00000451718 390 ntBASIC17.3■□□□□ 0.36
HIPK3Q9H422 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.3■□□□□ 0.36
HIPK3Q9H422 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK3Q9H422 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK3Q9H422 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.3■□□□□ 0.36
HIPK3Q9H422 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.3■□□□□ 0.36
HIPK3Q9H422 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK3Q9H422 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK3Q9H422 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK3Q9H422 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
HIPK3Q9H422 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK3Q9H422 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.3■□□□□ 0.36
HIPK3Q9H422 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.3■□□□□ 0.36
HIPK3Q9H422 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK3Q9H422 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK3Q9H422 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK3Q9H422 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK3Q9H422 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.3■□□□□ 0.36
HIPK3Q9H422 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK3Q9H422 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK3Q9H422 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HIPK3Q9H422 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.29■□□□□ 0.36
HIPK3Q9H422 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.29■□□□□ 0.36
HIPK3Q9H422 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.29■□□□□ 0.36
HIPK3Q9H422 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.29■□□□□ 0.36
HIPK3Q9H422 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
HIPK3Q9H422 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.29■□□□□ 0.36
HIPK3Q9H422 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.29■□□□□ 0.36
HIPK3Q9H422 AL607033.1-201ENST00000623900 1599 ntBASIC17.29■□□□□ 0.36
HIPK3Q9H422 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HIPK3Q9H422 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.29■□□□□ 0.36
HIPK3Q9H422 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HIPK3Q9H422 AC136604.1-201ENST00000418535 575 ntBASIC17.29■□□□□ 0.36
HIPK3Q9H422 CALR4P-201ENST00000431943 946 ntBASIC17.29■□□□□ 0.36
HIPK3Q9H422 AC104306.2-201ENST00000451877 341 ntBASIC17.29■□□□□ 0.36
HIPK3Q9H422 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.29■□□□□ 0.36
HIPK3Q9H422 KRT18P43-201ENST00000469825 1281 ntBASIC17.29■□□□□ 0.36
HIPK3Q9H422 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.29■□□□□ 0.36
HIPK3Q9H422 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.29■□□□□ 0.36
HIPK3Q9H422 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.29■□□□□ 0.36
HIPK3Q9H422 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.29■□□□□ 0.36
HIPK3Q9H422 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
HIPK3Q9H422 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.29■□□□□ 0.36
HIPK3Q9H422 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.29■□□□□ 0.36
HIPK3Q9H422 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.29■□□□□ 0.36
HIPK3Q9H422 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.29■□□□□ 0.36
HIPK3Q9H422 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HIPK3Q9H422 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 AC105020.1-201ENST00000435356 2205 ntBASIC17.28■□□□□ 0.36
HIPK3Q9H422 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 AL121723.1-201ENST00000445194 1519 ntBASIC17.28■□□□□ 0.36
HIPK3Q9H422 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HIPK3Q9H422 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.28■□□□□ 0.36
HIPK3Q9H422 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms