Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.18□□□□□ -0.14
MMP28Q9H239 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.18□□□□□ -0.14
MMP28Q9H239 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
MMP28Q9H239 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
MMP28Q9H239 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.18□□□□□ -0.14
MMP28Q9H239 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.18□□□□□ -0.14
MMP28Q9H239 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
MMP28Q9H239 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.18□□□□□ -0.14
MMP28Q9H239 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.18□□□□□ -0.14
MMP28Q9H239 SPDYE21P-201ENST00000413323 827 ntBASIC14.18□□□□□ -0.14
MMP28Q9H239 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
MMP28Q9H239 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
MMP28Q9H239 SIGLEC30P-201ENST00000455569 941 ntBASIC14.18□□□□□ -0.14
MMP28Q9H239 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.18□□□□□ -0.14
MMP28Q9H239 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.18□□□□□ -0.14
MMP28Q9H239 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.18□□□□□ -0.14
MMP28Q9H239 AC106795.1-205ENST00000512851 1056 ntBASIC14.18□□□□□ -0.14
MMP28Q9H239 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
MMP28Q9H239 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.18□□□□□ -0.14
MMP28Q9H239 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
MMP28Q9H239 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
MMP28Q9H239 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
MMP28Q9H239 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.18□□□□□ -0.14
MMP28Q9H239 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
MMP28Q9H239 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
MMP28Q9H239 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.18□□□□□ -0.14
MMP28Q9H239 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
MMP28Q9H239 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MMP28Q9H239 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
MMP28Q9H239 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.17□□□□□ -0.14
MMP28Q9H239 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.17□□□□□ -0.14
MMP28Q9H239 SIGLEC16-201ENST00000599858 1437 ntBASIC14.17□□□□□ -0.14
MMP28Q9H239 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.17□□□□□ -0.14
MMP28Q9H239 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
MMP28Q9H239 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
MMP28Q9H239 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 AC079776.2-201ENST00000641154 1609 ntBASIC14.17□□□□□ -0.14
MMP28Q9H239 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
MMP28Q9H239 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
MMP28Q9H239 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.17□□□□□ -0.14
MMP28Q9H239 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.17□□□□□ -0.14
MMP28Q9H239 AC079776.4-201ENST00000511039 504 ntBASIC14.17□□□□□ -0.14
MMP28Q9H239 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.17□□□□□ -0.14
MMP28Q9H239 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.17□□□□□ -0.14
MMP28Q9H239 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
MMP28Q9H239 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.17□□□□□ -0.14
MMP28Q9H239 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.17□□□□□ -0.14
MMP28Q9H239 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.17□□□□□ -0.14
MMP28Q9H239 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.17□□□□□ -0.14
MMP28Q9H239 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
MMP28Q9H239 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.17□□□□□ -0.14
MMP28Q9H239 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
MMP28Q9H239 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
MMP28Q9H239 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.17□□□□□ -0.14
MMP28Q9H239 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.17□□□□□ -0.14
MMP28Q9H239 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
MMP28Q9H239 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.17□□□□□ -0.14
MMP28Q9H239 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms