Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 AC090616.6-203ENST00000579186 1945 ntBASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FOXP3Q9BZS1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 CICP13-201ENST00000422015 2789 ntBASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 AC004461.1-201ENST00000412461 403 ntBASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 AC004449.1-201ENST00000564240 433 ntBASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 AC004835.2-201ENST00000603762 682 ntBASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 AL513210.1-201ENST00000629608 234 ntBASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FOXP3Q9BZS1 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 AC068587.6-202ENST00000641839 5619 ntBASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 WASH6P-202ENST00000359512 1437 ntBASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
FOXP3Q9BZS1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms