Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
USB1Q9BQ65 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
USB1Q9BQ65 AL137784.3-201ENST00000623858 2288 ntBASIC14.39□□□□□ -0.11
USB1Q9BQ65 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
USB1Q9BQ65 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
USB1Q9BQ65 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
USB1Q9BQ65 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
USB1Q9BQ65 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
USB1Q9BQ65 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
USB1Q9BQ65 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 RPS6P14-201ENST00000425165 719 ntBASIC14.38□□□□□ -0.11
USB1Q9BQ65 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 AL138918.1-201ENST00000568306 659 ntBASIC14.38□□□□□ -0.11
USB1Q9BQ65 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 AC007967.4-201ENST00000614700 386 ntBASIC14.38□□□□□ -0.11
USB1Q9BQ65 MIR6080-201ENST00000617359 66 ntBASIC14.38□□□□□ -0.11
USB1Q9BQ65 AC093512.1-201ENST00000617969 520 ntBASIC14.38□□□□□ -0.11
USB1Q9BQ65 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 AC068587.6-202ENST00000641839 5619 ntBASIC14.38□□□□□ -0.11
USB1Q9BQ65 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.38□□□□□ -0.11
USB1Q9BQ65 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USB1Q9BQ65 AC026691.1-201ENST00000602502 2017 ntBASIC14.37□□□□□ -0.11
USB1Q9BQ65 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USB1Q9BQ65 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
USB1Q9BQ65 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
USB1Q9BQ65 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USB1Q9BQ65 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
USB1Q9BQ65 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.37□□□□□ -0.11
USB1Q9BQ65 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
USB1Q9BQ65 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.37□□□□□ -0.11
USB1Q9BQ65 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.37□□□□□ -0.11
USB1Q9BQ65 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
USB1Q9BQ65 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
USB1Q9BQ65 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.37□□□□□ -0.11
USB1Q9BQ65 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
USB1Q9BQ65 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
USB1Q9BQ65 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.37□□□□□ -0.11
USB1Q9BQ65 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USB1Q9BQ65 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.37□□□□□ -0.11
USB1Q9BQ65 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
USB1Q9BQ65 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USB1Q9BQ65 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
USB1Q9BQ65 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.37□□□□□ -0.11
USB1Q9BQ65 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.37□□□□□ -0.11
USB1Q9BQ65 AC069120.2-201ENST00000524091 540 ntBASIC14.37□□□□□ -0.11
USB1Q9BQ65 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.37□□□□□ -0.11
USB1Q9BQ65 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms