Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFI1Q99684 AC104581.4-201ENST00000623126 3052 ntBASIC13.75□□□□□ -0.21
GFI1Q99684 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GFI1Q99684 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
GFI1Q99684 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GFI1Q99684 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFI1Q99684 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFI1Q99684 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFI1Q99684 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFI1Q99684 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFI1Q99684 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFI1Q99684 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
GFI1Q99684 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFI1Q99684 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFI1Q99684 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFI1Q99684 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
GFI1Q99684 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GFI1Q99684 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFI1Q99684 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GFI1Q99684 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GFI1Q99684 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.74□□□□□ -0.21
GFI1Q99684 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.74□□□□□ -0.21
GFI1Q99684 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
GFI1Q99684 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.74□□□□□ -0.21
GFI1Q99684 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
GFI1Q99684 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.74□□□□□ -0.21
GFI1Q99684 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
GFI1Q99684 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.74□□□□□ -0.21
GFI1Q99684 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.74□□□□□ -0.21
GFI1Q99684 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.74□□□□□ -0.21
GFI1Q99684 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 VN2R19P-201ENST00000442399 1052 ntBASIC13.74□□□□□ -0.21
GFI1Q99684 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.74□□□□□ -0.21
GFI1Q99684 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.74□□□□□ -0.21
GFI1Q99684 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.74□□□□□ -0.21
GFI1Q99684 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.74□□□□□ -0.21
GFI1Q99684 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.74□□□□□ -0.21
GFI1Q99684 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.74□□□□□ -0.21
GFI1Q99684 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.74□□□□□ -0.21
GFI1Q99684 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.74□□□□□ -0.21
GFI1Q99684 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.74□□□□□ -0.21
GFI1Q99684 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.74□□□□□ -0.21
GFI1Q99684 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.74□□□□□ -0.21
GFI1Q99684 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.74□□□□□ -0.21
GFI1Q99684 CICP14-201ENST00000629111 2732 ntBASIC13.74□□□□□ -0.21
GFI1Q99684 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GFI1Q99684 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.74□□□□□ -0.21
GFI1Q99684 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.74□□□□□ -0.21
GFI1Q99684 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GFI1Q99684 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.73□□□□□ -0.21
GFI1Q99684 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.73□□□□□ -0.21
GFI1Q99684 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.73□□□□□ -0.21
GFI1Q99684 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFI1Q99684 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.73□□□□□ -0.21
GFI1Q99684 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.73□□□□□ -0.21
GFI1Q99684 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFI1Q99684 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFI1Q99684 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.73□□□□□ -0.21
GFI1Q99684 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.73□□□□□ -0.21
GFI1Q99684 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
GFI1Q99684 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFI1Q99684 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFI1Q99684 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFI1Q99684 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.73□□□□□ -0.21
GFI1Q99684 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GFI1Q99684 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
GFI1Q99684 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFI1Q99684 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFI1Q99684 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.73□□□□□ -0.21
GFI1Q99684 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.73□□□□□ -0.21
GFI1Q99684 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.73□□□□□ -0.21
GFI1Q99684 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GFI1Q99684 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GFI1Q99684 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
GFI1Q99684 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
GFI1Q99684 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
GFI1Q99684 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
GFI1Q99684 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms