Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
GAFA1Q96PS6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 TARDBPP1-201ENST00000442013 1203 ntBASIC13.23□□□□□ -0.29
GAFA1Q96PS6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 AC093214.1-201ENST00000511688 1107 ntBASIC13.23□□□□□ -0.29
GAFA1Q96PS6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 AC025048.3-201ENST00000590609 569 ntBASIC13.23□□□□□ -0.29
GAFA1Q96PS6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 AC005702.4-201ENST00000618393 416 ntBASIC13.23□□□□□ -0.29
GAFA1Q96PS6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 PAUPAR-201ENST00000630360 2965 ntBASIC13.23□□□□□ -0.29
GAFA1Q96PS6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.23□□□□□ -0.29
GAFA1Q96PS6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.22□□□□□ -0.29
GAFA1Q96PS6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 FER1L4-210ENST00000615531 5998 ntBASIC13.22□□□□□ -0.29
GAFA1Q96PS6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 BASP1P1-201ENST00000430708 665 ntBASIC13.22□□□□□ -0.29
GAFA1Q96PS6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.22□□□□□ -0.29
GAFA1Q96PS6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms