Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 SIGLEC16-201ENST00000599858 1437 ntBASIC12.14□□□□□ -0.47
AP1S3Q96PC3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
AP1S3Q96PC3 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 AL603832.2-201ENST00000566195 2125 ntBASIC12.13□□□□□ -0.47
AP1S3Q96PC3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 AL136038.3-201ENST00000561909 1096 ntBASIC12.13□□□□□ -0.47
AP1S3Q96PC3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.13□□□□□ -0.47
AP1S3Q96PC3 TERC-201ENST00000602385 541 ntBASIC12.13□□□□□ -0.47
AP1S3Q96PC3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms