Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 CRB3P1-201ENST00000449338 276 ntBASIC17.28■□□□□ 0.36
ACAP3Q96P50 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ACAP3Q96P50 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.28■□□□□ 0.36
ACAP3Q96P50 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.28■□□□□ 0.36
ACAP3Q96P50 TIMM17BP1-201ENST00000545713 516 ntBASIC17.28■□□□□ 0.36
ACAP3Q96P50 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ACAP3Q96P50 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ACAP3Q96P50 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
ACAP3Q96P50 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.28■□□□□ 0.36
ACAP3Q96P50 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.28■□□□□ 0.36
ACAP3Q96P50 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ACAP3Q96P50 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ACAP3Q96P50 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.28■□□□□ 0.36
ACAP3Q96P50 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ACAP3Q96P50 AL162727.3-201ENST00000635661 2787 ntBASIC17.28■□□□□ 0.36
ACAP3Q96P50 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ACAP3Q96P50 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ACAP3Q96P50 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ACAP3Q96P50 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.27■□□□□ 0.36
ACAP3Q96P50 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ACAP3Q96P50 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ACAP3Q96P50 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.27■□□□□ 0.36
ACAP3Q96P50 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
ACAP3Q96P50 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.27■□□□□ 0.36
ACAP3Q96P50 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.27■□□□□ 0.36
ACAP3Q96P50 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ACAP3Q96P50 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ACAP3Q96P50 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ACAP3Q96P50 AL353779.1-201ENST00000434793 351 ntBASIC17.27■□□□□ 0.36
ACAP3Q96P50 TARDBPP1-201ENST00000442013 1203 ntBASIC17.27■□□□□ 0.36
ACAP3Q96P50 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.27■□□□□ 0.36
ACAP3Q96P50 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.27■□□□□ 0.36
ACAP3Q96P50 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.27■□□□□ 0.36
ACAP3Q96P50 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.27■□□□□ 0.36
ACAP3Q96P50 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.27■□□□□ 0.36
ACAP3Q96P50 AC092337.1-201ENST00000568699 1129 ntBASIC17.27■□□□□ 0.36
ACAP3Q96P50 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.27■□□□□ 0.36
ACAP3Q96P50 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.27■□□□□ 0.36
ACAP3Q96P50 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ACAP3Q96P50 AL132655.2-201ENST00000596276 594 ntBASIC17.27■□□□□ 0.36
ACAP3Q96P50 AC004790.1-201ENST00000612686 536 ntBASIC17.27■□□□□ 0.36
ACAP3Q96P50 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC17.27■□□□□ 0.36
ACAP3Q96P50 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ACAP3Q96P50 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.27■□□□□ 0.36
ACAP3Q96P50 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
ACAP3Q96P50 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
ACAP3Q96P50 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.27■□□□□ 0.35
ACAP3Q96P50 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
ACAP3Q96P50 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.26■□□□□ 0.35
ACAP3Q96P50 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.26■□□□□ 0.35
ACAP3Q96P50 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
ACAP3Q96P50 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ACAP3Q96P50 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
ACAP3Q96P50 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ACAP3Q96P50 AC015922.1-201ENST00000421102 1152 ntBASIC17.26■□□□□ 0.35
ACAP3Q96P50 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.26■□□□□ 0.35
ACAP3Q96P50 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.26■□□□□ 0.35
ACAP3Q96P50 AC093004.1-201ENST00000508850 424 ntBASIC17.26■□□□□ 0.35
ACAP3Q96P50 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.26■□□□□ 0.35
ACAP3Q96P50 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.26■□□□□ 0.35
ACAP3Q96P50 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.26■□□□□ 0.35
ACAP3Q96P50 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.26■□□□□ 0.35
ACAP3Q96P50 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.26■□□□□ 0.35
ACAP3Q96P50 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.26■□□□□ 0.35
ACAP3Q96P50 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.26■□□□□ 0.35
ACAP3Q96P50 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ACAP3Q96P50 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACAP3Q96P50 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ACAP3Q96P50 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ACAP3Q96P50 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.25■□□□□ 0.35
ACAP3Q96P50 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ACAP3Q96P50 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ACAP3Q96P50 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ACAP3Q96P50 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ACAP3Q96P50 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms