Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PGBD1Q96JS3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
PGBD1Q96JS3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PGBD1Q96JS3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.52■□□□□ 0.55
PGBD1Q96JS3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
PGBD1Q96JS3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
PGBD1Q96JS3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PGBD1Q96JS3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
PGBD1Q96JS3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 IGHV3-42-201ENST00000520410 361 ntBASIC18.51■□□□□ 0.55
PGBD1Q96JS3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 AC024267.1-201ENST00000582320 895 ntBASIC18.51■□□□□ 0.55
PGBD1Q96JS3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 MIR4321-201ENST00000592276 80 ntBASIC18.51■□□□□ 0.55
PGBD1Q96JS3 RN7SL828P-201ENST00000607615 303 ntBASIC18.51■□□□□ 0.55
PGBD1Q96JS3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 AL136982.4-201ENST00000437689 1740 ntBASIC18.51■□□□□ 0.55
PGBD1Q96JS3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
PGBD1Q96JS3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 MIR770-201ENST00000390219 98 ntBASIC18.5■□□□□ 0.55
PGBD1Q96JS3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.5■□□□□ 0.55
PGBD1Q96JS3 AC097493.3-201ENST00000509725 367 ntBASIC18.5■□□□□ 0.55
PGBD1Q96JS3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 AC069120.2-201ENST00000524091 540 ntBASIC18.5■□□□□ 0.55
PGBD1Q96JS3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 AL133215.2-201ENST00000609242 977 ntBASIC18.5■□□□□ 0.55
PGBD1Q96JS3 AL390754.1-201ENST00000619088 582 ntBASIC18.5■□□□□ 0.55
PGBD1Q96JS3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PGBD1Q96JS3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 AC093214.1-201ENST00000511688 1107 ntBASIC18.49■□□□□ 0.55
PGBD1Q96JS3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.49■□□□□ 0.55
PGBD1Q96JS3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms