Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 AZGP1P1-201ENST00000411909 902 ntBASIC16.22■□□□□ 0.19
RTP4Q96DX8 AL627223.1-201ENST00000416693 442 ntBASIC16.22■□□□□ 0.19
RTP4Q96DX8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 GPS2P2-201ENST00000430745 888 ntBASIC16.22■□□□□ 0.19
RTP4Q96DX8 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 AC004449.1-201ENST00000564240 433 ntBASIC16.22■□□□□ 0.19
RTP4Q96DX8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 AC126365.1-201ENST00000578585 1514 ntBASIC16.22■□□□□ 0.19
RTP4Q96DX8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 CROCCP1-201ENST00000426910 5675 ntBASIC16.22■□□□□ 0.19
RTP4Q96DX8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.21■□□□□ 0.19
RTP4Q96DX8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RTP4Q96DX8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTP4Q96DX8 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.21■□□□□ 0.19
RTP4Q96DX8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RTP4Q96DX8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.21■□□□□ 0.19
RTP4Q96DX8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RTP4Q96DX8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.21■□□□□ 0.19
RTP4Q96DX8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RTP4Q96DX8 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RTP4Q96DX8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RTP4Q96DX8 MIR770-201ENST00000390219 98 ntBASIC16.21■□□□□ 0.19
RTP4Q96DX8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.21■□□□□ 0.19
RTP4Q96DX8 AL353705.2-201ENST00000428243 662 ntBASIC16.21■□□□□ 0.19
RTP4Q96DX8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.21■□□□□ 0.19
RTP4Q96DX8 HIST3H2BA-201ENST00000436555 524 ntBASIC16.21■□□□□ 0.19
RTP4Q96DX8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RTP4Q96DX8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.21■□□□□ 0.19
RTP4Q96DX8 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.21■□□□□ 0.19
RTP4Q96DX8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.21■□□□□ 0.19
RTP4Q96DX8 AC105021.1-202ENST00000570572 669 ntBASIC16.21■□□□□ 0.19
RTP4Q96DX8 MIR3197-201ENST00000582241 73 ntBASIC16.21■□□□□ 0.19
RTP4Q96DX8 AC018529.1-201ENST00000613063 361 ntBASIC16.21■□□□□ 0.19
RTP4Q96DX8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RTP4Q96DX8 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTP4Q96DX8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTP4Q96DX8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.21■□□□□ 0.19
RTP4Q96DX8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RTP4Q96DX8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RTP4Q96DX8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RTP4Q96DX8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.21■□□□□ 0.18
RTP4Q96DX8 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.21■□□□□ 0.18
RTP4Q96DX8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RTP4Q96DX8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RTP4Q96DX8 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTP4Q96DX8 DBET-201ENST00000630918 3363 ntBASIC16.2■□□□□ 0.18
RTP4Q96DX8 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RTP4Q96DX8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.2■□□□□ 0.18
RTP4Q96DX8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RTP4Q96DX8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
RTP4Q96DX8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTP4Q96DX8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RTP4Q96DX8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RTP4Q96DX8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTP4Q96DX8 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RTP4Q96DX8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RTP4Q96DX8 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RTP4Q96DX8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.2■□□□□ 0.18
RTP4Q96DX8 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RTP4Q96DX8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RTP4Q96DX8 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms