Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.65■□□□□ 0.42
HPS3Q969F9 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.65■□□□□ 0.42
HPS3Q969F9 AC069262.1-201ENST00000539058 672 ntBASIC17.65■□□□□ 0.42
HPS3Q969F9 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.65■□□□□ 0.42
HPS3Q969F9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.65■□□□□ 0.42
HPS3Q969F9 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
HPS3Q969F9 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS3Q969F9 AC026979.3-201ENST00000607315 403 ntBASIC17.65■□□□□ 0.42
HPS3Q969F9 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.65■□□□□ 0.42
HPS3Q969F9 AC093028.1-201ENST00000622998 982 ntBASIC17.65■□□□□ 0.42
HPS3Q969F9 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.65■□□□□ 0.42
HPS3Q969F9 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS3Q969F9 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.65■□□□□ 0.42
HPS3Q969F9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HPS3Q969F9 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS3Q969F9 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS3Q969F9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.65■□□□□ 0.42
HPS3Q969F9 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.65■□□□□ 0.42
HPS3Q969F9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS3Q969F9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS3Q969F9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS3Q969F9 AC020658.6-201ENST00000623564 1870 ntBASIC17.65■□□□□ 0.42
HPS3Q969F9 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS3Q969F9 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
HPS3Q969F9 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.64■□□□□ 0.42
HPS3Q969F9 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HPS3Q969F9 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.64■□□□□ 0.42
HPS3Q969F9 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS3Q969F9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS3Q969F9 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS3Q969F9 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HPS3Q969F9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.64■□□□□ 0.41
HPS3Q969F9 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS3Q969F9 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPS3Q969F9 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPS3Q969F9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.64■□□□□ 0.41
HPS3Q969F9 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HPS3Q969F9 PHKG1P2-201ENST00000457537 863 ntBASIC17.64■□□□□ 0.41
HPS3Q969F9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.64■□□□□ 0.41
HPS3Q969F9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.64■□□□□ 0.41
HPS3Q969F9 HNRNPUP1-201ENST00000554987 333 ntBASIC17.64■□□□□ 0.41
HPS3Q969F9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.64■□□□□ 0.41
HPS3Q969F9 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.64■□□□□ 0.41
HPS3Q969F9 AL450472.2-201ENST00000603663 1156 ntBASIC17.64■□□□□ 0.41
HPS3Q969F9 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS3Q969F9 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS3Q969F9 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS3Q969F9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS3Q969F9 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HPS3Q969F9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.64■□□□□ 0.41
HPS3Q969F9 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.64■□□□□ 0.41
HPS3Q969F9 AC090616.6-203ENST00000579186 1945 ntBASIC17.64■□□□□ 0.41
HPS3Q969F9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.64■□□□□ 0.41
HPS3Q969F9 AC126177.1-201ENST00000547829 2218 ntBASIC17.64■□□□□ 0.41
HPS3Q969F9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS3Q969F9 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS3Q969F9 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HPS3Q969F9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.64■□□□□ 0.41
HPS3Q969F9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS3Q969F9 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS3Q969F9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS3Q969F9 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS3Q969F9 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.64■□□□□ 0.41
HPS3Q969F9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.64■□□□□ 0.41
HPS3Q969F9 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.64■□□□□ 0.41
HPS3Q969F9 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.64■□□□□ 0.41
HPS3Q969F9 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HPS3Q969F9 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS3Q969F9 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.64■□□□□ 0.41
HPS3Q969F9 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS3Q969F9 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS3Q969F9 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS3Q969F9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HPS3Q969F9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
HPS3Q969F9 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPS3Q969F9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPS3Q969F9 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.63■□□□□ 0.41
HPS3Q969F9 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS3Q969F9 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPS3Q969F9 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.63■□□□□ 0.41
HPS3Q969F9 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.63■□□□□ 0.41
HPS3Q969F9 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.63■□□□□ 0.41
HPS3Q969F9 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS3Q969F9 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.63■□□□□ 0.41
HPS3Q969F9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPS3Q969F9 AL512356.2-201ENST00000546955 174 ntBASIC17.63■□□□□ 0.41
HPS3Q969F9 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.63■□□□□ 0.41
HPS3Q969F9 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.63■□□□□ 0.41
HPS3Q969F9 AC097359.3-201ENST00000603982 1210 ntBASIC17.63■□□□□ 0.41
HPS3Q969F9 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS3Q969F9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS3Q969F9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS3Q969F9 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS3Q969F9 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.63■□□□□ 0.41
HPS3Q969F9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS3Q969F9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS3Q969F9 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HPS3Q969F9 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HPS3Q969F9 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.63■□□□□ 0.41
HPS3Q969F9 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms