Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 AL662799.1-202ENST00000614205 422 ntBASIC18.7■□□□□ 0.58
STAG1Q8WVM7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
STAG1Q8WVM7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.69■□□□□ 0.58
STAG1Q8WVM7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
STAG1Q8WVM7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
STAG1Q8WVM7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
STAG1Q8WVM7 CICP6-201ENST00000457191 2729 ntBASIC18.68■□□□□ 0.58
STAG1Q8WVM7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
STAG1Q8WVM7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
STAG1Q8WVM7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
STAG1Q8WVM7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.68■□□□□ 0.58
STAG1Q8WVM7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.68■□□□□ 0.58
STAG1Q8WVM7 DOC2GP-202ENST00000514950 1163 ntBASIC18.68■□□□□ 0.58
STAG1Q8WVM7 AP005018.1-201ENST00000525475 301 ntBASIC18.68■□□□□ 0.58
STAG1Q8WVM7 AC005225.4-201ENST00000557330 545 ntBASIC18.68■□□□□ 0.58
STAG1Q8WVM7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.68■□□□□ 0.58
STAG1Q8WVM7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.68■□□□□ 0.58
STAG1Q8WVM7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
STAG1Q8WVM7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
STAG1Q8WVM7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
STAG1Q8WVM7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
STAG1Q8WVM7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
STAG1Q8WVM7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
STAG1Q8WVM7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
STAG1Q8WVM7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
STAG1Q8WVM7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
STAG1Q8WVM7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
STAG1Q8WVM7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.67■□□□□ 0.58
STAG1Q8WVM7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
STAG1Q8WVM7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.67■□□□□ 0.58
STAG1Q8WVM7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
STAG1Q8WVM7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
STAG1Q8WVM7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
STAG1Q8WVM7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
STAG1Q8WVM7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
STAG1Q8WVM7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
STAG1Q8WVM7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms