Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CU634019.7-201ENST00000624153 1185 ntBASIC24.55■■□□□ 1.52
VPS8Q8N3P4 FP236241.2-201ENST00000624906 1185 ntBASIC24.55■■□□□ 1.52
VPS8Q8N3P4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
VPS8Q8N3P4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
VPS8Q8N3P4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC24.55■■□□□ 1.52
VPS8Q8N3P4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
VPS8Q8N3P4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
VPS8Q8N3P4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
VPS8Q8N3P4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC24.55■■□□□ 1.52
VPS8Q8N3P4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC24.55■■□□□ 1.52
VPS8Q8N3P4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC24.55■■□□□ 1.52
VPS8Q8N3P4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
VPS8Q8N3P4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC24.55■■□□□ 1.52
VPS8Q8N3P4 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC24.55■■□□□ 1.52
VPS8Q8N3P4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
VPS8Q8N3P4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
VPS8Q8N3P4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC24.54■■□□□ 1.52
VPS8Q8N3P4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC24.53■■□□□ 1.52
VPS8Q8N3P4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
VPS8Q8N3P4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
VPS8Q8N3P4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
VPS8Q8N3P4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC24.53■■□□□ 1.52
VPS8Q8N3P4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
VPS8Q8N3P4 AC011495.1-201ENST00000498085 584 ntBASIC24.53■■□□□ 1.52
VPS8Q8N3P4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC24.53■■□□□ 1.52
VPS8Q8N3P4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC24.53■■□□□ 1.52
VPS8Q8N3P4 AC133539.2-201ENST00000604757 467 ntBASIC24.53■■□□□ 1.52
VPS8Q8N3P4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
VPS8Q8N3P4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
VPS8Q8N3P4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
VPS8Q8N3P4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
VPS8Q8N3P4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
VPS8Q8N3P4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
VPS8Q8N3P4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
VPS8Q8N3P4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
VPS8Q8N3P4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
VPS8Q8N3P4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC24.53■■□□□ 1.52
VPS8Q8N3P4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC24.53■■□□□ 1.52
VPS8Q8N3P4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
VPS8Q8N3P4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
VPS8Q8N3P4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC24.52■■□□□ 1.52
VPS8Q8N3P4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC24.52■■□□□ 1.52
VPS8Q8N3P4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC24.52■■□□□ 1.52
VPS8Q8N3P4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC24.52■■□□□ 1.52
VPS8Q8N3P4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC24.52■■□□□ 1.52
VPS8Q8N3P4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
VPS8Q8N3P4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
VPS8Q8N3P4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
VPS8Q8N3P4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
VPS8Q8N3P4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC24.52■■□□□ 1.52
VPS8Q8N3P4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
VPS8Q8N3P4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC24.52■■□□□ 1.52
VPS8Q8N3P4 AC104457.1-201ENST00000401024 814 ntBASIC24.52■■□□□ 1.52
VPS8Q8N3P4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
VPS8Q8N3P4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC24.52■■□□□ 1.52
VPS8Q8N3P4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
VPS8Q8N3P4 AL645728.2-202ENST00000641679 227 ntBASIC24.52■■□□□ 1.52
VPS8Q8N3P4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
VPS8Q8N3P4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS8Q8N3P4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC24.51■■□□□ 1.51
VPS8Q8N3P4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS8Q8N3P4 AC093525.8-201ENST00000624099 1342 ntBASIC24.51■■□□□ 1.51
VPS8Q8N3P4 AC090616.6-203ENST00000579186 1945 ntBASIC24.51■■□□□ 1.51
VPS8Q8N3P4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
VPS8Q8N3P4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
VPS8Q8N3P4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC24.51■■□□□ 1.51
VPS8Q8N3P4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS8Q8N3P4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS8Q8N3P4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC24.51■■□□□ 1.51
VPS8Q8N3P4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC24.51■■□□□ 1.51
VPS8Q8N3P4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
VPS8Q8N3P4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC24.51■■□□□ 1.51
VPS8Q8N3P4 AC015936.2-201ENST00000593177 259 ntBASIC24.51■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms