Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PROM2Q8N271 AL596276.2-201ENST00000447525 331 ntBASIC20.05■□□□□ 0.8
PROM2Q8N271 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC20.05■□□□□ 0.8
PROM2Q8N271 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC20.05■□□□□ 0.8
PROM2Q8N271 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PROM2Q8N271 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC20.05■□□□□ 0.8
PROM2Q8N271 DIO1-215ENST00000610607 796 ntTSL 5 BASIC20.05■□□□□ 0.8
PROM2Q8N271 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PROM2Q8N271 AL138799.1-201ENST00000448213 1675 ntBASIC20.05■□□□□ 0.8
PROM2Q8N271 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC20.05■□□□□ 0.8
PROM2Q8N271 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
PROM2Q8N271 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PROM2Q8N271 AL354989.2-201ENST00000435838 1540 ntBASIC20.05■□□□□ 0.8
PROM2Q8N271 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PROM2Q8N271 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PROM2Q8N271 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.05■□□□□ 0.8
PROM2Q8N271 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PROM2Q8N271 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PROM2Q8N271 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PROM2Q8N271 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PROM2Q8N271 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.05■□□□□ 0.8
PROM2Q8N271 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PROM2Q8N271 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.04■□□□□ 0.8
PROM2Q8N271 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PROM2Q8N271 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
PROM2Q8N271 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PROM2Q8N271 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
PROM2Q8N271 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC20.04■□□□□ 0.8
PROM2Q8N271 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PROM2Q8N271 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PROM2Q8N271 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.04■□□□□ 0.8
PROM2Q8N271 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PROM2Q8N271 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.04■□□□□ 0.8
PROM2Q8N271 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PROM2Q8N271 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PROM2Q8N271 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC20.04■□□□□ 0.8
PROM2Q8N271 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PROM2Q8N271 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PROM2Q8N271 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC20.04■□□□□ 0.8
PROM2Q8N271 LY6E-208ENST00000520531 490 ntTSL 2 BASIC20.04■□□□□ 0.8
PROM2Q8N271 TMF1P1-201ENST00000576058 373 ntBASIC20.04■□□□□ 0.8
PROM2Q8N271 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC20.04■□□□□ 0.8
PROM2Q8N271 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC20.04■□□□□ 0.8
PROM2Q8N271 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC20.04■□□□□ 0.8
PROM2Q8N271 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PROM2Q8N271 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PROM2Q8N271 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PROM2Q8N271 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PROM2Q8N271 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PROM2Q8N271 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PROM2Q8N271 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PROM2Q8N271 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PROM2Q8N271 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PROM2Q8N271 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.03■□□□□ 0.8
PROM2Q8N271 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PROM2Q8N271 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PROM2Q8N271 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PROM2Q8N271 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PROM2Q8N271 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PROM2Q8N271 AC079178.1-201ENST00000420915 656 ntBASIC20.03■□□□□ 0.8
PROM2Q8N271 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PROM2Q8N271 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC20.03■□□□□ 0.8
PROM2Q8N271 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC20.03■□□□□ 0.8
PROM2Q8N271 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
PROM2Q8N271 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC20.03■□□□□ 0.8
PROM2Q8N271 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC20.03■□□□□ 0.8
PROM2Q8N271 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC20.03■□□□□ 0.8
PROM2Q8N271 RN7SL48P-201ENST00000579283 293 ntBASIC20.03■□□□□ 0.8
PROM2Q8N271 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC20.03■□□□□ 0.8
PROM2Q8N271 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PROM2Q8N271 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PROM2Q8N271 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PROM2Q8N271 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC20.03■□□□□ 0.8
PROM2Q8N271 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PROM2Q8N271 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC20.03■□□□□ 0.8
PROM2Q8N271 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PROM2Q8N271 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PROM2Q8N271 KC6-207ENST00000600644 2311 ntTSL 3 BASIC20.03■□□□□ 0.8
PROM2Q8N271 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PROM2Q8N271 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PROM2Q8N271 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PROM2Q8N271 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PROM2Q8N271 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PROM2Q8N271 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PROM2Q8N271 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PROM2Q8N271 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PROM2Q8N271 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PROM2Q8N271 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PROM2Q8N271 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PROM2Q8N271 ACTBP8-201ENST00000403258 1108 ntBASIC20.02■□□□□ 0.8
PROM2Q8N271 AL627389.1-201ENST00000413508 1182 ntBASIC20.02■□□□□ 0.8
PROM2Q8N271 AL008707.1-201ENST00000422498 534 ntBASIC20.02■□□□□ 0.8
PROM2Q8N271 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PROM2Q8N271 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PROM2Q8N271 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC20.02■□□□□ 0.8
PROM2Q8N271 AC012618.1-201ENST00000461223 412 ntBASIC20.02■□□□□ 0.8
PROM2Q8N271 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PROM2Q8N271 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC20.02■□□□□ 0.8
PROM2Q8N271 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC20.02■□□□□ 0.8
PROM2Q8N271 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms