Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 AC068587.10-201ENST00000641210 219 ntBASIC15.77■□□□□ 0.12
TMEFF1Q8IYR6 AC005052.1-201ENST00000625181 2492 ntBASIC15.77■□□□□ 0.11
TMEFF1Q8IYR6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMEFF1Q8IYR6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.77■□□□□ 0.11
TMEFF1Q8IYR6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.77■□□□□ 0.11
TMEFF1Q8IYR6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.77■□□□□ 0.11
TMEFF1Q8IYR6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TMEFF1Q8IYR6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMEFF1Q8IYR6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TMEFF1Q8IYR6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.11
TMEFF1Q8IYR6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMEFF1Q8IYR6 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.77■□□□□ 0.11
TMEFF1Q8IYR6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.77■□□□□ 0.11
TMEFF1Q8IYR6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMEFF1Q8IYR6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMEFF1Q8IYR6 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
TMEFF1Q8IYR6 PCDHA14-201ENST00000506751 2298 ntBASIC15.77■□□□□ 0.11
TMEFF1Q8IYR6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 AC092933.1-201ENST00000393644 945 ntBASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 VDAC1P7-201ENST00000462417 847 ntBASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 POU5F1P6-201ENST00000466990 990 ntBASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 RPL13AP25-201ENST00000484130 612 ntBASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 AL592424.1-201ENST00000563624 1536 ntBASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 PRORSD1P-202ENST00000563365 2154 ntBASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEFF1Q8IYR6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 MSTO2P-201ENST00000314835 1709 ntBASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 BAATP1-201ENST00000412284 1225 ntBASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 PFN1P12-201ENST00000455938 534 ntBASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 AP000812.2-201ENST00000538934 718 ntBASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 AC120045.2-201ENST00000567334 178 ntBASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 AC010328.2-201ENST00000597698 1111 ntBASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEFF1Q8IYR6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms