Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 RN7SL736P-201ENST00000613111 269 ntBASIC22.06■■□□□ 1.12
UBR1Q8IWV7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 AC011742.3-201ENST00000439053 820 ntBASIC22.06■■□□□ 1.12
UBR1Q8IWV7 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
UBR1Q8IWV7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
UBR1Q8IWV7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
UBR1Q8IWV7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC22.05■■□□□ 1.12
UBR1Q8IWV7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC22.05■■□□□ 1.12
UBR1Q8IWV7 AC011477.6-201ENST00000604980 1927 ntBASIC22.05■■□□□ 1.12
UBR1Q8IWV7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
UBR1Q8IWV7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC22.05■■□□□ 1.12
UBR1Q8IWV7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC22.05■■□□□ 1.12
UBR1Q8IWV7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
UBR1Q8IWV7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
UBR1Q8IWV7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
UBR1Q8IWV7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
UBR1Q8IWV7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
UBR1Q8IWV7 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC22.05■■□□□ 1.12
UBR1Q8IWV7 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
UBR1Q8IWV7 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
UBR1Q8IWV7 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
UBR1Q8IWV7 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
UBR1Q8IWV7 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
UBR1Q8IWV7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
UBR1Q8IWV7 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
UBR1Q8IWV7 AL805961.1-203ENST00000641078 1258 ntBASIC22.05■■□□□ 1.12
UBR1Q8IWV7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 Z97180.1-201ENST00000445173 988 ntBASIC22.04■■□□□ 1.12
UBR1Q8IWV7 FGFR3P1-201ENST00000449999 601 ntBASIC22.04■■□□□ 1.12
UBR1Q8IWV7 AC012618.1-201ENST00000461223 412 ntBASIC22.04■■□□□ 1.12
UBR1Q8IWV7 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 AC125604.1-201ENST00000496255 707 ntBASIC22.04■■□□□ 1.12
UBR1Q8IWV7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 AL645728.2-202ENST00000641679 227 ntBASIC22.04■■□□□ 1.12
UBR1Q8IWV7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
UBR1Q8IWV7 KRT8P29-201ENST00000420409 1371 ntBASIC22.03■■□□□ 1.12
UBR1Q8IWV7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
UBR1Q8IWV7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
UBR1Q8IWV7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
UBR1Q8IWV7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
UBR1Q8IWV7 CLUHP2-201ENST00000426660 1303 ntBASIC22.03■■□□□ 1.12
UBR1Q8IWV7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
UBR1Q8IWV7 AC011491.1-203ENST00000637688 543 ntBASIC22.03■■□□□ 1.12
UBR1Q8IWV7 AC004899.1-201ENST00000424687 1714 ntBASIC22.03■■□□□ 1.12
UBR1Q8IWV7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
UBR1Q8IWV7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
UBR1Q8IWV7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
UBR1Q8IWV7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
UBR1Q8IWV7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC22.03■■□□□ 1.12
UBR1Q8IWV7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
UBR1Q8IWV7 AL133373.2-201ENST00000623187 2828 ntBASIC22.03■■□□□ 1.12
UBR1Q8IWV7 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
UBR1Q8IWV7 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC22.03■■□□□ 1.12
UBR1Q8IWV7 NPPA-201ENST00000376476 728 ntTSL 3 BASIC22.03■■□□□ 1.12
UBR1Q8IWV7 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC22.03■■□□□ 1.12
UBR1Q8IWV7 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC22.03■■□□□ 1.12
UBR1Q8IWV7 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC22.03■■□□□ 1.12
UBR1Q8IWV7 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC22.03■■□□□ 1.12
UBR1Q8IWV7 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
UBR1Q8IWV7 AC004466.1-201ENST00000599515 1080 ntBASIC22.03■■□□□ 1.12
UBR1Q8IWV7 AL353726.2-201ENST00000623259 884 ntBASIC22.03■■□□□ 1.12
UBR1Q8IWV7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC22.02■■□□□ 1.12
UBR1Q8IWV7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC22.02■■□□□ 1.12
UBR1Q8IWV7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC22.02■■□□□ 1.12
UBR1Q8IWV7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
UBR1Q8IWV7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
UBR1Q8IWV7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
UBR1Q8IWV7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC22.02■■□□□ 1.12
UBR1Q8IWV7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
UBR1Q8IWV7 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms