Protein–RNA interactions for Protein: Q8IVN8

SBSPON, Somatomedin-B and thrombospondin type-1 domain-containing protein, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPONQ8IVN8 SDHAP3-202ENST00000515467 728 ntBASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 AC026979.3-201ENST00000607315 403 ntBASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 Six3os1_5.1-201ENST00000611000 271 ntBASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 AC004461.2-201ENST00000629517 803 ntBASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 KRT8P12-202ENST00000472924 1397 ntBASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.89□□□□□ -0.51
SBSPONQ8IVN8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 POLL-206ENST00000370172 2308 ntTSL 2 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 GOLGA8DP-202ENST00000341390 2184 ntBASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 AL589702.1-201ENST00000641229 1509 ntBASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 TTTY23B-201ENST00000442790 549 ntBASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 AC093724.1-201ENST00000448659 1027 ntBASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 AC023310.3-201ENST00000557027 670 ntBASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 AC100756.1-201ENST00000562736 682 ntBASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 AC138749.3-201ENST00000567691 622 ntBASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 AC106886.1-201ENST00000568660 600 ntBASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 AC116165.1-201ENST00000611806 668 ntBASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 HLA-A-202ENST00000376806 1854 ntBASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SBSPONQ8IVN8 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SBSPONQ8IVN8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC11.87□□□□□ -0.51
SBSPONQ8IVN8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
SBSPONQ8IVN8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC11.87□□□□□ -0.51
SBSPONQ8IVN8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC11.87□□□□□ -0.51
SBSPONQ8IVN8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SBSPONQ8IVN8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms