Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 MIR4492-201ENST00000581627 80 ntBASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 TMEM191A-211ENST00000637163 1067 ntBASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 AL359881.3-201ENST00000602640 1721 ntBASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LYSMD2Q8IV50 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 SPDYE21P-201ENST00000413323 827 ntBASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 AP005901.3-202ENST00000581653 237 ntBASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 AC011498.5-201ENST00000592027 486 ntBASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 AP000867.4-201ENST00000641616 219 ntBASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 INTS4P1-201ENST00000438455 1935 ntBASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 ZBED1P1-201ENST00000502364 1930 ntBASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD2Q8IV50 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
LYSMD2Q8IV50 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms